RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
TOP3A-215ENST00000583328 CHKBQ9Y259 395 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 PCDHGB7Q9Y5F8 929 aa12.11□□□□□ -0.47
TOP3A-215ENST00000583328 ITPR2Q14571 2701 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 WIPF3A6NGB9 483 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 LRRC53A6NM62 1247 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 PDZK1P1A8MUH7 402 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 FADS2P1A8MWK0 482 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 TMCO5BA8MYB1 307 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 LDLRP01130 860 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 GYPCP04921 128 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 NELFEP18615 380 aaKnown RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 SPINT3P49223 89 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF75DP51815 510 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 ZBED6P86452 979 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 TUBB3Q13509 450 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 SEPT7Q16181 437 aaKnown RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 INSCQ1MX18 579 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 TDRD12Q587J7 1177 aaKnown RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF648Q5T619 568 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 HENMT1Q5T8I9 393 aaKnown RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 PWWP2BQ6NUJ5 590 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 SIDT2Q8NBJ9 832 aaKnown RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 CCHCR1Q8TD31 782 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 FCRL4Q96PJ5 515 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 PHF12Q96QT6 1004 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 POLR1EQ9GZS1 481 aaKnown RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 OR2AG1Q9H205 316 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 TAS2R14Q9NYV8 317 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 PKD2L2Q9NZM6 624 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 ZNF624Q9P2J8 865 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-215ENST00000583328 CAPN11Q9UMQ6 739 aa12.1□□□□□ -0.47
TOP3A-215ENST00000583328 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 SPENQ96T58 3664 aaKnown RBP12.09□□□□□ -0.47
TOP3A-215ENST00000583328 C1orf232A0A0U1RR37 186 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 TMEM191CA6NGB0 347 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-215ENST00000583328 MTA2O94776 668 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 TPM1P09493 284 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 FOLR1P15328 257 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 ELAVL4P26378 380 aaKnown RBP12.09□□□□□ -0.47
TOP3A-215ENST00000583328 CAPZBP47756 277 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 ACY1Q03154 408 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 IL10RAQ13651 578 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 ASIC2Q16515 512 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 PLA2G4EQ3MJ16 856 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 SLC6A19Q695T7 634 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 PLEKHA7Q6IQ23 1121 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 CRTC3Q6UUV7 619 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 POLNQ7Z5Q5 900 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 HPS6Q86YV9 775 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 RHOT1Q8IXI2 618 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 TEX26Q8N6G2 289 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 Q8NA96 180 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 CPLX3Q8WVH0 158 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 HSPH1Q92598 858 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 MR1Q95460 341 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 CXorf40BQ96DE9 158 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 C5orf34Q96MH7 638 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 TRIM7Q9C029 511 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 POT1Q9NUX5 634 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 AIPL1Q9NZN9 384 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 EPHA6Q9UF33 1036 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 SLC23A2Q9UGH3 650 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 SLC5A6Q9Y289 635 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 DNAJC16Q9Y2G8 782 aa12.09□□□□□ -0.47
TOP3A-215ENST00000583328 LUC7L2Q9Y383 392 aaKnown RBP12.09□□□□□ -0.47
TOP3A-215ENST00000583328 RGSL1A5PLK6 1076 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 A6NL46 340 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 ZNF185O15231 689 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 KRT86O43790 486 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SLC25A14O95258 325 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 PRLP01236 227 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 ZNF7P17097 686 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 LPOP22079 712 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 CA4P22748 312 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 CES1P23141 567 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SERPINB6P35237 376 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 PRKCIP41743 596 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 PTGIRP43119 386 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 ARL4DP49703 201 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 DSC2Q02487 901 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 KCNAB1Q14722 419 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 NR6A1Q15406 480 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 DPYSL2Q16555 572 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 SMTNL2Q2TAL5 461 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 BOLA3Q53S33 107 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 C1QL3Q5VWW1 255 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 IRF2BP2Q7Z5L9 587 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
TOP3A-215ENST00000583328 RBM12BQ8IXT5 1001 aaKnown RBP12.08□□□□□ -0.48
TOP3A-215ENST00000583328 RBMXL3Q8N7X1 1067 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms