RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PCDHB1Q9Y5F3 818 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 RP1P56715 2156 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 AKAP13Q12802 2813 aa12.43□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 GOLGA6L10A0A0M3HER8 536 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 TMEM8BA6NDV4 472 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 OR2AG2A6NM03 316 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 PDZK1P1A8MUH7 402 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF185O15231 689 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 TCEA3O75764 348 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 SLC2A4P14672 509 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 PNLIPP16233 465 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF7P17097 686 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 TCP1P17987 556 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 VCLP18206 1134 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ALDH4A1P30038 563 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 PBLDP30039 288 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 PPM1FP49593 454 aaPredicted RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ST3GAL2Q16842 350 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ISXQ2M1V0 245 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ZRANB3Q5FWF4 1079 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 CCDC137Q6PK04 289 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 SNX20Q7Z614 316 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 SPRED1Q7Z699 444 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ZNF547Q8IVP9 402 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 MDM1Q8TC05 714 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ACTRT1Q8TDG2 376 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ULK4Q96C45 1275 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 NXPE2Q96DL1 559 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 DCUN1D1Q96GG9 259 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 C19orf43Q9BQ61 176 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 TIMM29Q9BSF4 260 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 STN1Q9H668 368 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 CASS4Q9NQ75 786 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 PRDM8Q9NQV8 689 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 EIF2B3Q9NR50 452 aaKnown RBP12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 FRYQ5TBA9 3013 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ASPMQ8IZT6 3477 aa12.42□□□□□ -0.42
SMARCE1-218ENST00000582955 ZFC3H1O60293 1989 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 A0A1W2PQM1 296 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 HEATR9A2RTY3 570 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 D6RAR5 112 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 H7C0S8 307 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 NTN3O00634 580 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 CES2O00748 559 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 PPM1DO15297 605 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 ZW10O43264 779 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 PHF2O75151 1096 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 KRT14P02533 472 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 RALBP11234 206 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 F3P13726 295 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 COILP38432 576 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 CLCNKAP51800 687 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 CTSCP53634 463 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 OR1D5P58170 312 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 HHEXQ03014 270 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 GPS1Q13098 491 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 LAMB3Q13751 1172 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 SKIDA1Q1XH10 827 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 AMZ1Q400G9 498 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 MAP9Q49MG5 647 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 FNBP1LQ5T0N5 605 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 TMEM220Q6QAJ8 160 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 MICALCLQ6ZW33 695 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 TAS2R42Q7RTR8 314 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 NXPE1Q8N323 547 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 SFRP1Q8N474 314 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 PPHLN1Q8NEY8 458 aaKnown RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 CDKN2AIPNLQ96HQ2 116 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 COPS8Q99627 209 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 NAPGQ99747 312 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 ATXN7L1Q9ULK2 861 aaPredicted RBP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 KNTC1P50748 2209 aa12.41□□□□□ -0.42
SMARCE1-218ENST00000582955 KIR2DS5A0A0G2JLQ3 304 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 A0A0G2JNG1 304 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 A6NCN8 305 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 MROH6A6NGR9 719 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 OR5K4A6NMS3 321 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 CFAP99D6REC4 459 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 KIR2DS3K7RE56 304 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 B4GAT1O43505 415 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 POP7O75817 140 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 PRSS56P0CW18 603 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 IDSP22304 550 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ADRA1DP25100 572 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 RPL10P27635 214 aaKnown RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 GPR3P46089 330 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 CDKN1CP49918 316 aaPredicted RBP12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 ARSDP51689 593 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 B4GALNT1Q00973 533 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 CACNG1Q06432 222 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 KIR2DS5Q14953 304 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 CYP1B1Q16678 543 aa12.4□□□□□ -0.42
SMARCE1-218ENST00000582955 GPR33Q49SQ1 333 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms