RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 UGT1A3P35503 534 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 UGT1A5P35504 534 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 TUFMP49411 452 aaKnown RBP13.52□□□□□ -0.24
GGA3-214ENST00000582717 NFKB2Q00653 900 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 CCNYL2Q5T2Q4 361 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 GRAMD4Q6IC98 578 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 KIAA1841Q6NSI8 718 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 C16orf87Q6PH81 154 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 TMEM26Q6ZUK4 368 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 KCTD8Q6ZWB6 473 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 SPNS2Q8IVW8 549 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 CMTR2Q8IYT2 770 aaKnown RBP13.52□□□□□ -0.24
GGA3-214ENST00000582717 CLYBLQ8N0X4 340 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 MIER2Q8N344 545 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 PNPLA1Q8N8W4 532 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 OR13J1Q8NGT2 312 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 HDAC10Q969S8 669 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 SEMA3CQ99985 751 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 NACA2Q9H009 215 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.24
GGA3-214ENST00000582717 ZFP37Q9Y6Q3 630 aaPredicted RBP13.52□□□□□ -0.24
GGA3-214ENST00000582717 FUOMA2VDF0 154 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 SERPINB7O75635 380 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 SEC24DO94855 1032 aaPredicted RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 MATN4O95460 622 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 ALDOCP09972 364 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 UMPSP11172 480 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 GFAPP14136 432 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 JUNBP17275 347 aaPredicted RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 RPS24P62847 133 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 ILF2Q12905 390 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 ZNF789Q5FWF6 425 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 FGD3Q5JSP0 725 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 ANKRD26P1Q6NSI1 321 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 FAM117BQ6P1L5 589 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 USP51Q70EK9 711 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 GALNT7Q86SF2 657 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 DENND1CQ8IV53 801 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 TBC1D21Q8IYX1 336 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 PAPD5Q8NDF8 572 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 OR7D4Q8NG98 312 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 FAM110BQ8TC76 370 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 TSPEARQ8WU66 669 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 TRUB1Q8WWH5 349 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 UBXN10Q96LJ8 280 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 CDK5RAP1Q96SZ6 601 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 C1orf50Q9BV19 199 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 TDRD1Q9BXT4 1180 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 MUC3BQ9H195 1237 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 INTS10Q9NVR2 710 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 SEPT3Q9UH03 358 aa13.52□□□□□ -0.25
GGA3-214ENST00000582717 AFF4Q9UHB7 1163 aaKnown RBP13.52□□□□□ -0.25
GGA3-214ENST00000582717 FAM149AA5PLN7 773 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 H0YAE9 185 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 H3BNC9 293 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 FXYD1O00168 92 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 CCL22O00626 93 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 UBFD1O14562 309 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 EI24O14681 340 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 ARPC2O15144 300 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 KLKB1P03952 638 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 CCNA2P20248 432 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 RFC2P35250 354 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 RPS9P46781 194 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 LEPRP48357 1165 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 BCAP31P51572 246 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 SGSHP51688 502 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 TUBA3CQ13748 450 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 CYBRD1Q53TN4 286 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 ZNF678Q5SXM1 525 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 HECTD3Q5T447 861 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 RBM20Q5T481 1227 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 NIPAL1Q6NVV3 410 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 ZNF773Q6PK81 442 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 RNF135Q8IUD6 432 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 DDIASQ8IXT1 998 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 CENPSQ8N2Z9 138 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 PDZD8Q8NEN9 1154 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 OVCA2Q8WZ82 227 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 WBP2Q969T9 261 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 PHF21BQ96EK2 531 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 CEP295NLQ96MC4 621 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 OLFM1Q99784 485 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 POLR1EQ9GZS1 481 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 AKTIPQ9H8T0 292 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 GKN1Q9NS71 199 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 CMTM6Q9NX76 183 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 GMPR2Q9P2T1 348 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 ANAPC1Q9H1A4 1944 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 LOC285095A0A1B0GVY8 99 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 MROH6A6NGR9 719 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 ABLIM3O94929 683 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 PARNO95453 639 aaKnown RBP13.51□□□□□ -0.25
GGA3-214ENST00000582717 FGF4P08620 206 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 SLC6A2P23975 617 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 ARSDP51689 593 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 PLK1P53350 603 aa13.51□□□□□ -0.25
GGA3-214ENST00000582717 GNA12Q03113 381 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms