RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MAP7D3Q8IWC1 876 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 STPG4Q8N801 248 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 TMEM116Q8NCL8 245 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 OR52I2Q8NH67 350 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 HCAR2Q8TDS4 363 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 LINGO1Q96FE5 620 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 PERPQ96FX8 193 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 POM121L2Q96KW2 1035 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 LINC00479Q96M42 142 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 NEURL2Q9BR09 285 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 STRA6Q9BX79 667 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 RANGRFQ9HD47 186 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 LTB4R2Q9NPC1 389 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 CCDC177Q9NQR7 707 aaPredicted RBP3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 OR14J1Q9UGF5 321 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 ACSL5Q9ULC5 683 aa3.11□□□□□ -1.91
SMCHD1-206ENST00000581631 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 A0A0J9YWU9 116 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 A0A1W2PQF6 199 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 A0A1W2PRG0 241 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 TCERG1O14776 1098 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 ANKRD28O15084 1053 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 ARHGEF9O43307 516 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 SRSF10O75494 262 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 MLYCDO95822 493 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 CD48P09326 243 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 UBA1P22314 1058 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 UBA7P41226 1012 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 CCR9P51686 369 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 EEF1A1P68104 462 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 PLIN5Q00G26 463 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 TBCEQ15813 527 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 TSTQ16762 297 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 EEF1A1P5Q5VTE0 462 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 CYP20A1Q6UW02 462 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 TRPT1Q86TN4 253 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 DIS3L2Q8IYB7 885 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 IL17REQ8NFR9 667 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 THAP6Q8TBB0 222 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 FAM149B1Q96BN6 582 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 ARHGEF26Q96DR7 871 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 WDFY2Q96P53 400 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 SMC6Q96SB8 1091 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 TRIM15Q9C019 465 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 PDCL3Q9H2J4 239 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 PIGMQ9H3S5 423 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 POLR1BQ9H9Y6 1135 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 UPF2Q9HAU5 1272 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 ZDHHC18Q9NUE0 388 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 MAP3K20Q9NYL2 800 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 COPG2Q9UBF2 871 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 STK39Q9UEW8 545 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 CLIC4Q9Y696 253 aa3.1□□□□□ -1.91
SMCHD1-206ENST00000581631 ZCWPW2A0A1B0GU75 182 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 NDUFAF8A1L188 74 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 FAM90A26D6RGX4 464 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 H3BQ06 376 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 ATP2A1O14983 1001 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 EIF3DO15371 548 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 KCNN4O15554 427 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 JRKO75564 520 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 RTN3O95197 1032 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 IPO7O95373 1038 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 TERF1P54274 439 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 MRPS5P82675 430 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 RUNX1T1Q06455 604 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 CSTF3Q12996 717 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 G3BP1Q13283 466 aaKnown RBP eCLIP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 MYLK3Q32MK0 819 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 KRTCAP3Q53RY4 240 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 TCTE1Q5JU00 501 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 INTS11Q5TA45 600 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 PAPD4Q6PIY7 484 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 ZNF704Q6ZNC4 412 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 ADSSL1Q8N142 457 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 AMER3Q8N944 861 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 OR1J2Q8NGS2 313 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 ETNPPLQ8TBG4 499 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 MAP7D2Q96T17 732 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 LRMDAQ9H2I8 198 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 TMEM181Q9P2C4 612 aa3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 MARCH4Q9P2E8 410 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-206ENST00000581631 TDRD15B5MCY1 1934 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-206ENST00000581631 FAM237BA0A1B0GVD1 139 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 OR5K3A6NET4 321 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 EIF4E1BA6NMX2 242 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 TMEM178BH3BS89 294 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 SYNGR3O43761 229 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 SLC25A12O75746 678 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 UGT1A1P22309 533 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 BSGP35613 385 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 PRCPP42785 496 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 RPS3AP61247 264 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 GOLGA8DPQ0D2H9 430 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 ITGA9Q13797 1035 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 PDE1CQ14123 709 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 PNLIPRP3Q17RR3 467 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 ZNF805Q5CZA5 627 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 LRIF1Q5T3J3 769 aa3.08□□□□□ -1.92
SMCHD1-206ENST00000581631 NSUN5P2Q63ZY6 315 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms