RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 ADGRA1Q86SQ6 560 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 GPR180Q86V85 440 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 CEP97Q8IW35 865 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 EMC1Q8N766 993 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 KCTD6Q8NC69 237 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 TANKQ92844 425 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 FIZ1Q96SL8 496 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 CDRT15Q96T59 188 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 DDOQ99489 341 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 TXLNGYQ9BZA5 131 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 RAD21L1Q9H4I0 556 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PCDH9Q9HC56 1237 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PSD3Q9NYI0 1048 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 DNAJB4Q9UDY4 337 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 TSPYL4Q9UJ04 414 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 KCNS2Q9ULS6 477 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PPIEQ9UNP9 301 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 PCDHGA5Q9Y5G8 931 aa4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF644Q9H582 1327 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-205ENST00000581383 hCG_1809904A0A1W2PP81 198 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 A0A1W2PPE2 198 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 A0A1W2PR64 198 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 A6NL46 340 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 FAM90A26D6RGX4 464 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 EIF5BO60841 1220 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 RFPL2O75678 378 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 CAMTA2O94983 1202 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 ZWINTO95229 277 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 GH2P01242 217 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 CORO1AP31146 461 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 PDLIM4P50479 330 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 CLDN20P56880 219 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 BRWD1-AS2P59051 145 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 EGR4Q05215 589 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF155Q12901 538 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 GRAPQ13588 217 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 TNFAIP1Q13829 316 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 RASA2Q15283 850 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 CALCRLQ16602 461 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 KRT79Q5XKE5 535 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 NADSYN1Q6IA69 706 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 CCNI2Q6ZMN8 369 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 KRT74Q7RTS7 529 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF114Q8NC26 417 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 CCDC191Q8NCU4 936 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 MCUQ8NE86 351 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 OR5R1Q8NH85 324 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 MAGEC3Q8TD91 643 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 ELP5Q8TE02 316 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 UTP15Q8TED0 518 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 SLC44A1Q8WWI5 657 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 TMCO6Q96DC7 493 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 PHF21BQ96EK2 531 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 RTN4RQ9BZR6 473 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 TM6SF1Q9BZW5 370 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 MCM9Q9NXL9 1143 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 TAS2R14Q9NYV8 317 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 HACL1Q9UJ83 578 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF148Q9UQR1 794 aa4.6□□□□□ -1.67
SMCHD1-205ENST00000581383 IGLV5-37A0A075B6J1 123 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 LOC100509620A0A075B734 347 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 LOC102723996A0A087X1L8 192 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 CLEC18AA5D8T8 446 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 TMEM8BA6NDV4 472 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 IFITM10A6NMD0 228 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 TMEM189-UBE2V1I3L0A0 370 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 MID1O15344 667 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 ZBTB43O43298 467 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 ZNF217O75362 1048 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 PRLRP16471 622 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 S1PR1P21453 382 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 NMBRP28336 390 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 TMPOP42166 694 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 LIG4P49917 911 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 RPL36AP83881 106 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 UBE2V1Q13404 147 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 BAATQ14032 418 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 KRT33BQ14525 404 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 MEP1AQ16819 746 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 SYT16Q17RD7 645 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 PDS5AQ29RF7 1337 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 C15orf59Q2T9L4 293 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 KRTCAP3Q53RY4 240 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 MINDY1Q8N5J2 469 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 CLEC18CQ8NCF0 446 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 PTPMT1Q8WUK0 201 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 FAM84BQ96KN1 310 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 QRFPRQ96P65 431 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 GFI1Q99684 422 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 HGH1Q9BTY7 390 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 SLC35C2Q9NQQ7 365 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 TAB2Q9NYJ8 693 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 MDFICQ9P1T7 246 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 NFKBIL1Q9UBC1 381 aaPredicted RBP4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 ICAM5Q9UMF0 924 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 TRPV2Q9Y5S1 764 aa4.59□□□□□ -1.67
SMCHD1-205ENST00000581383 PRAG1Q86YV5 1406 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 J3QR06 171 aa4.58□□□□□ -1.68
SMCHD1-205ENST00000581383 BCL10O95999 233 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms