RNA–Protein interactions for RNA: ENST00000579647.1

CBX3P2-201, Transcript of chromobox 3 pseudogene 2, humanhuman

TSL 2 BASIC

Gene CBX3P2, Length 1,429 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P2-201ENST00000579647 SYDE1Q6ZW31 735 aaPredicted RBP16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 EFL1Q7Z2Z2 1120 aaKnown RBP16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 PCGF5Q86SE9 256 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 SERPINA9Q86WD7 417 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 NXPE1Q8N323 547 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 MPP5Q8N3R9 675 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 ARL10Q8N8L6 244 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 GPR156Q8NFN8 814 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 OR6P1Q8NGX9 317 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 IFI44Q8TCB0 444 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 PATE1Q8WXA2 126 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 ADAMTS14Q8WXS8 1223 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 SGF29Q96ES7 293 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 CCDC97Q96F63 343 aaPredicted RBP16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 SERPINB12Q96P63 405 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 TRIM31Q9BZY9 425 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 ZCCHC2Q9C0B9 1178 aaKnown RBP16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 KLC4Q9NSK0 619 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 CDC23Q9UJX2 597 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 DNAJC16Q9Y2G8 782 aa16.78■□□□□ 0.28
CBX3P2-201ENST00000579647 SPTBN4Q9H254 2564 aa16.77■□□□□ 0.28
CBX3P2-201ENST00000579647 TRBV5-4A0A0C4DH59 114 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 EME2A4GXA9 379 aaPredicted RBP16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 NOBOXO60393 691 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 SNX2O60749 519 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 POP7O75817 140 aaKnown RBP16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 DKK1O94907 266 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 EML2O95834 649 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 GOT2P00505 430 aaKnown RBP16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 MLNP12872 115 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 FOXN2P32314 431 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 PRAMEP78395 509 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 B4GALNT1Q00973 533 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 ACVR1Q04771 509 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 DHX34Q14147 1143 aaKnown RBP16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 INSCQ1MX18 579 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 CASC4Q6P4E1 433 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 PIANPQ8IYJ0 282 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 MFSD3Q96ES6 412 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 DCUN1D1Q96GG9 259 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 COPS8Q99627 209 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 ZDHHC3Q9NYG2 299 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 NCKIPSDQ9NZQ3 722 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 TBC1D29Q9UFV1 150 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 PCDHGA1Q9Y5H4 931 aa16.77■□□□□ 0.27
CBX3P2-201ENST00000579647 SDR42E2A6NKP2 422 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 TRIM16O95361 564 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 SPINK2P20155 84 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 ACRV1P26436 265 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 MAZP56270 477 aaKnown RBP16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 CLDN6P56747 220 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 ILKQ13418 452 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 C14orf28Q4W4Y0 310 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 PERM1Q5SV97 790 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 FNBP1LQ5T0N5 605 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 AFTPHQ6ULP2 937 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 C11orf96Q7Z7L8 435 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 NAGSQ8N159 534 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 BEND7Q8N7W2 519 aaPredicted RBP16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 OR4L1Q8NH43 312 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 KIFC1Q9BW19 673 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 OSGEPL1Q9H4B0 414 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 XAB2Q9HCS7 855 aaKnown RBP16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 PRDM8Q9NQV8 689 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 SOX13Q9UN79 622 aa16.76■□□□□ 0.27
CBX3P2-201ENST00000579647 EFCAB8A8MWE9 144 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 HYAL3O43820 417 aaPredicted RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 TUBB4AP04350 444 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 RALBP11234 206 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 ATP1B2P14415 290 aaPredicted RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 PBLDP30039 288 aaPredicted RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 DBN1Q16643 649 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 FASTKD1Q53R41 847 aaKnown RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 RAB44Q7Z6P3 723 aaPredicted RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 ARL14Q8N4G2 192 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 HEXDCQ8WVB3 486 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 PEX13Q92968 403 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 TRIM56Q9BRZ2 755 aaKnown RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 TIMM29Q9BSF4 260 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 MRM3Q9HC36 420 aaKnown RBP16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 TREX1Q9NSU2 369 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 SAMD15Q9P1V8 674 aa16.75■□□□□ 0.27
CBX3P2-201ENST00000579647 CFAP99D6REC4 459 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 KIF2AO00139 706 aaPredicted RBP16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 CASC3O15234 703 aaKnown RBP16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 RAD51CO43502 376 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 SGTAO43765 313 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 PMLP29590 882 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 CLCNKAP51800 687 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 E2F1Q01094 437 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 CKAP4Q07065 602 aaKnown RBP16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 HLTFQ14527 1009 aaKnown RBP eCLIP16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 MAATS1Q7Z4T9 603 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 LDB1Q86U70 411 aaPredicted RBP16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 HOOK3Q86VS8 718 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 AGGF1Q8N302 714 aaeCLIP16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 CCDC74AQ96AQ1 378 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 SIGLEC10Q96LC7 697 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 PWWP2AQ96N64 755 aa16.74■□□□□ 0.27
CBX3P2-201ENST00000579647 CCDC3Q9BQI4 270 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms