RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 METTL18O95568 372 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 AP2A1O95782 977 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 EML2O95834 649 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 ITGA2BP08514 1039 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 VCLP18206 1134 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A6P19224 532 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A1P22309 533 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A4P22310 534 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 CD1CP29017 333 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A3P35503 534 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A5P35504 534 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 HADHAP40939 763 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 GDF10P55107 478 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 HHEXQ03014 270 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 AMZ1Q400G9 498 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 CRTC3Q6UUV7 619 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 WASH2PQ6VEQ5 465 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 RAB11FIP2Q7L804 512 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 CLEC14AQ86T13 490 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 ZNF547Q8IVP9 402 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 FBXO39Q8N4B4 442 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 OR4K2Q8NGD2 314 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 ZNF398Q8TD17 642 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 SLC38A3Q99624 504 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.63□□□□□ -0.07
SS18-212ENST00000579061 FOXP3Q9BZS1 431 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A7Q9HAW7 530 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A10Q9HAW8 530 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 UGT1A8Q9HAW9 530 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 WASH6PQ9NQA3 447 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 KCNK4Q9NYG8 393 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 SLC23A2Q9UGH3 650 aa14.63□□□□□ -0.07
SS18-212ENST00000579061 ERI2A8K979 691 aaKnown RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 AGAP14A8MT82 685 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 PRAMEF1O95521 474 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 XRCC1P18887 633 aaPredicted RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 ABCG1P45844 678 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 ZNF140P52738 457 aaPredicted RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 EPHA4P54764 986 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 DMPKQ09013 629 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 TRA2AQ13595 282 aaKnown RBP eCLIP14.62□□□□□ -0.07
SS18-212ENST00000579061 SPARCL1Q14515 664 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 GPRC6AQ5T6X5 926 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 DRICH1Q6PGQ1 229 aaPredicted RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 ABRAXAS1Q6UWZ7 409 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 TMPRSS9Q7Z410 1059 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 C11orf96Q7Z7L8 435 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 LINC00523Q86TU6 105 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 TRAPPC5Q8IUR0 188 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 OR4D9Q8NGE8 314 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 HNRNPLLQ8WVV9 542 aaKnown RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 MAIP1Q8WWC4 291 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 ATG4AQ8WYN0 398 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 ZNF514Q96K75 400 aaPredicted RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 CMKLR1Q99788 373 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 OSGEPL1Q9H4B0 414 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 EPB41L1Q9H4G0 881 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 UCK1Q9HA47 277 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 GRPEL1Q9HAV7 217 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 RDH14Q9HBH5 336 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 AKAP7Q9P0M2 348 aaPredicted RBP14.62□□□□□ -0.07
SS18-212ENST00000579061 CPNE7Q9UBL6 633 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 LHX6Q9UPM6 363 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 ZKSCAN5Q9Y2L8 839 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 PPP2R2CQ9Y2T4 447 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 PCDHGA7Q9Y5G6 932 aa14.62□□□□□ -0.07
SS18-212ENST00000579061 TRBV23OR9-2A0A075B6M9 112 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 KLHL33A6NCF5 533 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 H7C0S8 307 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 HGSO14964 777 aaPredicted RBP14.61□□□□□ -0.07
SS18-212ENST00000579061 LDB2O43679 373 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 DUX1O43812 170 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 SNX2O60749 519 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 SRP72O76094 671 aaKnown RBP14.61□□□□□ -0.07
SS18-212ENST00000579061 TNFSF15O95150 251 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 IDSP22304 550 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 FDFT1P37268 417 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 LIMK2P53671 638 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 UBE2IP63279 158 aaKnown RBP14.61□□□□□ -0.07
SS18-212ENST00000579061 XIAPP98170 497 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 PTPRCAPQ14761 206 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 CCNG2Q16589 344 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 COL28A1Q2UY09 1125 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 AGAP9Q5VTM2 703 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 TMEM71Q6P5X7 295 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 FOXR1Q6PIV2 292 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 C19orf48Q6RUI8 117 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 ZNF574Q6ZN55 896 aaPredicted RBP14.61□□□□□ -0.07
SS18-212ENST00000579061 USP53Q70EK8 1073 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 RASGEF1AQ8N9B8 481 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 OR10G6Q8NH81 332 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 ULK4Q96C45 1275 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 CCDC97Q96F63 343 aaPredicted RBP14.61□□□□□ -0.07
SS18-212ENST00000579061 NUDT22Q9BRQ3 303 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 TLR10Q9BXR5 811 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 DPH1Q9BZG8 443 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 B3GNT4Q9C0J1 378 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 SEMA6CQ9H3T2 930 aa14.61□□□□□ -0.07
SS18-212ENST00000579061 ASB8Q9H765 288 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms