RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 ZNF674Q2M3X9 581 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 EMC4Q5J8M3 183 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 TMTC4Q5T4D3 741 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 SFRP5Q5T4F7 317 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 GARNL3Q5VVW2 1013 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 RFWD3Q6PCD5 774 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 SERPINA13PQ6UXR4 307 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 C22orf34Q6ZV56 151 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 CHST9Q7L1S5 443 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 TADA2BQ86TJ2 420 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 TAC4Q86UU9 113 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 FAM90A1Q86YD7 464 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 GLB1L2Q8IW92 636 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 ARHGEF19Q8IW93 802 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 FMR1NBQ8N0W7 255 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 CADM4Q8NFZ8 388 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 OR2T3Q8NH03 318 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 GSDMBQ8TAX9 411 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 SPATA20Q8TB22 786 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 UBA3Q8TBC4 463 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 DDI1Q8WTU0 396 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 SNX19Q92543 992 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 PRCCQ92733 491 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 HOXB13Q92826 284 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 PTP4A1Q93096 173 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 SIPA1Q96FS4 1042 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 RBM18Q96H35 190 aaKnown RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 APOPT1Q96IL0 206 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 FCRL2Q96LA5 508 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 HEXIM2Q96MH2 286 aaKnown RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 BBC3Q96PG8 261 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 CDK5RAP1Q96SZ6 601 aaKnown RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 ACAT2Q9BWD1 397 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 TRIM5Q9C035 493 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 DCLK3Q9C098 648 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 PITHD1Q9GZP4 211 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 LHX5Q9H2C1 402 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 FAM124BQ9H5Z6 455 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 GAREM1Q9H706 876 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 CHODLQ9H9P2 273 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 COPS7BQ9H9Q2 264 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 EBF2Q9HAK2 575 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 BRF2Q9HAW0 419 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 TM9SF3Q9HD45 589 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 HEYLQ9NQ87 328 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 DECR2Q9NUI1 292 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 AP5S1Q9NUS5 200 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 GGA2Q9UJY4 613 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 NAALADL1Q9UQQ1 740 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 ZNF510Q9Y2H8 683 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 HBS1LQ9Y450 684 aaKnown RBP4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 SNX11Q9Y5W9 270 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 FAM169AQ9Y6X4 670 aa4.9□□□□□ -1.63
GAPLINC-202ENST00000579007 RP1P56715 2156 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 ASXL3Q9C0F0 2248 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 URB1O60287 2271 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 TMEM110-MUSTN1A8MSY1 372 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 SHISA8B8ZZ34 492 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 C22orf46C9J442 243 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 M0QYV0 167 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 BCAT2O15382 392 aaPredicted RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 DYRK3O43781 588 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 TBL1XO60907 577 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 PIAS2O75928 621 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 ZNF202O95125 648 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 TRIM16O95361 564 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 SEMA4FO95754 770 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 CER1O95813 267 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 LATS1O95835 1130 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 IGLV3-25P01717 112 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 WNT1P04628 370 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 SNRNP70P08621 437 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 CCDC159P0C7I6 412 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 ATXN1LP0C7T5 689 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 ZNF883P0CG24 379 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 TMIGD3P0DMS9 266 aaPredicted RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 UBL4AP11441 157 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 CD19P15391 556 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 GNSP15586 552 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 MAPK3P27361 379 aaPredicted RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 EPHA8P29322 1005 aaPredicted RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 MATKP42679 507 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 CSNK1EP49674 416 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 IRAK1P51617 712 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 PPP5CP53041 499 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 ALDH18A1P54886 795 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 NRG3P56975 720 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 PPP2CBP62714 309 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 RPS24P62847 133 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 PPP2CAP67775 309 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 RPP30P78346 268 aaKnown RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 HABP2Q14520 560 aaPredicted RBP4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 MORF4L2Q15014 288 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 SHBQ15464 509 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 KIF19Q2TAC6 998 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 COL28A1Q2UY09 1125 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 HLA-BQ31612 363 aa4.89□□□□□ -1.63
GAPLINC-202ENST00000579007 MPPE1Q53F39 396 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms