RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 PITPNM3Q9BZ71 974 aa13.96□□□□□ -0.17
SREBF1-217ENST00000577897 ABCG4Q9H172 646 aa13.96□□□□□ -0.17
SREBF1-217ENST00000577897 ARID1BQ8NFD5 2236 aaPredicted RBP13.96□□□□□ -0.17
SREBF1-217ENST00000577897 NBASA2RRP1 2371 aa13.96□□□□□ -0.18
SREBF1-217ENST00000577897 ITPR2Q14571 2701 aa13.96□□□□□ -0.18
SREBF1-217ENST00000577897 BSNQ9UPA5 3926 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CXorf51AA0A1B0GTR3 108 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CXorf49A8MYA2 514 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 PFDN6O15212 129 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 TBL1XO60907 577 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 SIN3BO75182 1162 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 LUC7L3O95232 432 aaKnown RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 PEX11BO96011 259 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 ITGA2BP08514 1039 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CREB1P16220 341 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 POLR2EP19388 210 aaKnown RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 TYK2P29597 1187 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 ALDH3A1P30838 453 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CRHR1P34998 444 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CCNFP41002 786 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CCR5P51681 352 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 PPP2CBP62714 309 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 PPP2CAP67775 309 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 SLC12A1Q13621 1099 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 PCSK7Q16549 785 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 ARTNQ5T4W7 220 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 MROH9Q5TGP6 573 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 RNF219Q5W0B1 726 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 ALG1LQ6GMV1 187 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 KIAA0930Q6ICG6 404 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 RETSATQ6NUM9 610 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 KDELC1Q6UW63 502 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 KIAA0408Q6ZU52 694 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CIR1Q86X95 450 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 NDUFAF2Q8N183 169 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 CARNMT1Q8N4J0 409 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 SEC16BQ96JE7 1060 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 PSKH2Q96QS6 385 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 SEMA3CQ99985 751 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 APOL2Q9BQE5 337 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 C2orf49Q9BVC5 232 aaPredicted RBP13.95□□□□□ -0.18
SREBF1-217ENST00000577897 ADGRE3Q9BY15 652 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 KCNK4Q9NYG8 393 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3DA0A087WVF3 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3IA0A087WXS9 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3EA0A087X179 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3KA0A087X1G2 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3FA6NER0 549 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3LB9A6J9 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 SUV39H1O43463 412 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 C1QAP02745 245 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3HP0C7X1 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TROVE2P10155 538 aaKnown RBP eCLIP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 ERVK-10P10266 1014 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TPH1P17752 444 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 ACVRL1P37023 503 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 PSMD8P48556 350 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 NEK3P51956 506 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 KPNA2P52292 529 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 ADPRHP54922 357 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 ST8SIA6P61647 398 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 RPS24P62847 133 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 CDK18Q07002 472 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 SLC20A2Q08357 652 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 SEPT6Q14141 434 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 UBAP2LQ14157 1087 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 POU6F1Q14863 301 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 SLC1A5Q15758 541 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 LINC00303Q3SY05 128 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 C4orf17Q53FE4 359 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 INO80DQ53TQ3 878 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3GQ6DHY5 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3CQ6IPX1 549 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 YTHDF3Q7Z739 585 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 FAM217AQ8IXS0 508 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 LRRC34Q8IZ02 419 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TBC1D3Q8IZP1 549 aaPredicted RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 MFSD2AQ8NA29 543 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 EXTL1Q92935 676 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 SRPK1Q96SB4 655 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 RBBP8Q99708 897 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 MGME1Q9BQP7 344 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 CHRAC1Q9NRG0 131 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 STARD5Q9NSY2 213 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 PIH1D1Q9NWS0 290 aaKnown RBP13.94□□□□□ -0.18
SREBF1-217ENST00000577897 UCKL1Q9NWZ5 548 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 KLHL14Q9P2G3 628 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 TLK1Q9UKI8 766 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 RIMKLBQ9ULI2 386 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 FZD4Q9ULV1 537 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 C2CD3Q4AC94 2353 aa13.94□□□□□ -0.18
SREBF1-217ENST00000577897 ZCWPW2A0A1B0GU75 182 aa13.93□□□□□ -0.18
SREBF1-217ENST00000577897 GOLGA8RI6L899 631 aa13.93□□□□□ -0.18
SREBF1-217ENST00000577897 BIRC5O15392 142 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms