RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 PITRM1Q5JRX3 1037 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 GTF2IRD2BQ6EKJ0 949 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 KIAA1211LQ6NV74 962 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 MED27Q6P2C8 311 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 C22orf39Q6P5X5 142 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 RNF19BQ6ZMZ0 732 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 NEK10Q6ZWH5 1172 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC26A9Q7LBE3 791 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 GTF2IRD2Q86UP8 949 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 LIX1LQ8IVB5 337 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC39A11Q8N1S5 342 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CATSPER1Q8NEC5 780 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CCDC54Q8NEL0 328 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 OR4E2Q8NGC2 313 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 OR52K1Q8NGK4 314 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2T34Q8NGX1 318 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ETNPPLQ8TBG4 499 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ADAMTS19Q8TE59 1207 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CHTF18Q8WVB6 975 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 SMPDL3AQ92484 453 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CPT1BQ92523 772 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ZBTB10Q96DT7 871 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 RADILQ96JH8 1075 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ARL5BQ96KC2 179 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 TGM7Q96PF1 710 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 RNF157Q96PX1 679 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CCNL2Q96S94 520 aaPredicted RBP2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CYP2S1Q96SQ9 504 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 EDEM2Q9BV94 578 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 RIOK2Q9BVS4 552 aaKnown RBP2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 RIBC2Q9H4K1 309 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 CCSER2Q9H7U1 834 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 KCNK13Q9HB14 408 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 IL21RQ9HBE5 538 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 HEBP1Q9NRV9 189 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 SPATS2LQ9NUQ6 558 aaKnown RBP2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 COL20A1Q9P218 1284 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 HMGXB4Q9UGU5 601 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 ACSL5Q9ULC5 683 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 OGDHLQ9ULD0 1010 aa2.9□□□□□ -1.94
SMCHD1-203ENST00000577880 BCLAF3A2AJT9 711 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 WDR27A2RRH5 827 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KLHL33A6NCF5 533 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CCT8L1PA6NM43 557 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 E7ENQ6 273 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PRR23D1E9PI22 279 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 H3BN98 237 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MKRN2OSH3BPM6 223 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 H3BQF6 201 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 KIAA0355O15063 1070 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 UBDO15205 165 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CHADO15335 359 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FARS2O95363 451 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TP53P04637 393 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 FHP07954 510 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PRR23D2P0DMB1 279 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CCNCP24863 283 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 POLD2P49005 469 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CAPZA1P52907 286 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PLK1P53350 603 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ARHGAP8P85298 464 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PRR5P85299 388 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MYBPC1Q00872 1141 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PPP3CAQ08209 521 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 NR1I3Q14994 352 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CHI3L2Q15782 390 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 NTRK3Q16288 839 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 BMT2Q1RMZ1 405 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RALGPS1Q5JS13 557 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 DCAF12Q5T6F0 453 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 LRRC38Q5VT99 294 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CDC73Q6P1J9 531 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CRTC1Q6UUV9 634 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PEG10Q86TG7 708 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 EPHX4Q8IUS5 362 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TMEM151BQ8IW70 566 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ZADH2Q8N4Q0 377 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 DCAF4L2Q8NA75 395 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF527Q8NB42 609 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 WDR36Q8NI36 951 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 HAS1Q92839 578 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GTPBP3Q969Y2 492 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 LINGO1Q96FE5 620 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TOE1Q96GM8 510 aaKnown RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TEPSINQ96N21 525 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ZNF599Q96NL3 588 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 LPAR4Q99677 370 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ERP44Q9BS26 406 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 TRIM51Q9BSJ1 452 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ROPN1BQ9BZX4 212 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 SEMA6BQ9H3T3 888 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 GAREM1Q9H706 876 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 RMI1Q9H9A7 625 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 ROPN1Q9HAT0 212 aaPredicted RBP2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 PCDH18Q9HCL0 1135 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 OSER1Q9NX31 292 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 MIOSQ9NXC5 875 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 CALML5Q9NZT1 146 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 OGFRQ9NZT2 677 aa2.9□□□□□ -1.95
SMCHD1-203ENST00000577880 DNAJB4Q9UDY4 337 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms