RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MEP1AQ16819 746 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CTC1Q2NKJ3 1217 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CDC73Q6P1J9 531 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 USP43Q70EL4 1123 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZZZ3Q8IYH5 903 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 BIRC7Q96CA5 298 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 DIRAS2Q96HU8 199 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 PGLYRP2Q96PD5 576 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 DHRS4Q9BTZ2 278 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC25A51Q9H1U9 297 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 TRPV5Q9NQA5 729 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 FZD1Q9UP38 647 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ITIH1P19827 911 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 HNF4AP41235 474 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ALDH9A1P49189 494 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 NDUFV1P49821 464 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 NDST2P52849 883 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 MS4A2Q01362 244 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 FOXM1Q08050 763 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 RABL3Q5HYI8 236 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 GPR20Q99678 358 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SOX17Q9H6I2 414 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 PCDHB5Q9Y5E4 795 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 BTBD19C9JJ37 291 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 SNAP29O95721 258 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 OR56A5P0C7T3 313 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 NR2F6P10588 404 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 AQP1P29972 269 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ERVK-8P63133 956 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CYS1Q717R9 158 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 TBC1D19Q8N5T2 526 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 RASSF5Q8WWW0 418 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ESAMQ96AP7 390 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 MOCOSQ96EN8 888 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 RPF2Q9H7B2 306 aaKnown RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF490Q9ULM2 529 aaPredicted RBP13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 CORO2BQ9UQ03 480 aa13.01□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZBTB7AO95365 584 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 THPOP40225 353 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 CHRNA4P43681 627 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 CSNK2BP67870 215 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 HSPA14Q0VDF9 509 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 CAMK2GQ13555 558 aaPredicted RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ARMC12Q5T9G4 340 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC13A3Q8WWT9 602 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ADAMTS10Q9H324 1103 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 EHD1Q9H4M9 534 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 GOLGA2P5Q9HBQ8 144 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SMOXQ9NWM0 555 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SPATA7Q9P0W8 599 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SNX7Q9UNH6 387 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 DNAJB1P25685 340 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ELK4P28324 431 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ICAM3P32942 547 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ADCYAP1R1P41586 468 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ARSFP54793 590 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 STARD3Q14849 445 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MAP1SQ66K74 1059 aaPredicted RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 TMEM192Q8IY95 271 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 WDTC1Q8N5D0 677 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 UXS1Q8NBZ7 420 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 OR4K2Q8NGD2 314 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 EXOC2Q96KP1 924 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 IPPKQ9H8X2 491 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 CDKN2AIPQ9NXV6 580 aaPredicted RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 M0QX08 132 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 COL6A1P12109 1028 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MC4RP32245 332 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 KIR3DL1P43629 444 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF132P52740 706 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MBTD1Q05BQ5 628 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ZNF252P-AS1Q0IIN9 211 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SLC39A12Q504Y0 691 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ERICH5Q6P6B1 374 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 RPS27LQ71UM5 84 aaKnown RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 COLGALT2Q8IYK4 626 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ELMOD1Q8N336 334 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 BTN2A2Q8WVV5 523 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 PIH1D2Q8WWB5 315 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 FZD8Q9H461 694 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ABCB9Q9NP78 766 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MRPL39Q9NYK5 338 aaKnown RBP13□□□□□ -0.33
PCDHGB3-201ENST00000576222 A0A1W2PP18 115 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 ILVBLA1L0T0 632 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 hCG_2039718K7EN88 272 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 IRF6O14896 467 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 GABBR2O75899 941 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 DSC2Q02487 901 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 SULT2A1Q06520 285 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 MTA1Q13330 715 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 FAM174BQ3ZCQ3 159 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 RETSATQ6NUM9 610 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 BORAQ6PGQ7 559 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 C11orf88Q6PI97 169 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 C16orf62Q7Z3J2 963 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 GANCQ8TET4 914 aa13□□□□□ -0.33
PCDHGB3-201ENST00000576222 IPCEF1Q8WWN9 437 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms