RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 KIR2DS3K7RE56 304 aa15.04■□□□□ -0
SMG6-220ENST00000576218 NTN3O00634 580 aaPredicted RBP15.04■□□□□ -0
SMG6-220ENST00000576218 CHUKO15111 745 aa15.04■□□□□ -0
SMG6-220ENST00000576218 APRTP07741 180 aa15.04■□□□□ -0
SMG6-220ENST00000576218 F3P13726 295 aa15.04■□□□□ -0
SMG6-220ENST00000576218 ETS1P14921 441 aa15.04■□□□□ -0
SMG6-220ENST00000576218 IDSP22304 550 aa15.04■□□□□ -0
SMG6-220ENST00000576218 MC4RP32245 332 aa15.04■□□□□ -0
SMG6-220ENST00000576218 HALP42357 657 aa15.04■□□□□ -0
SMG6-220ENST00000576218 GPR3P46089 330 aa15.04■□□□□ -0
SMG6-220ENST00000576218 ZNF140P52738 457 aaPredicted RBP15.04■□□□□ -0
SMG6-220ENST00000576218 LAMB3Q13751 1172 aa15.04■□□□□ -0
SMG6-220ENST00000576218 KIR2DS5Q14953 304 aa15.04■□□□□ -0
SMG6-220ENST00000576218 RTP5Q14D33 572 aa15.04■□□□□ -0
SMG6-220ENST00000576218 KCTD11Q693B1 232 aa15.04■□□□□ -0
SMG6-220ENST00000576218 DENND5AQ6IQ26 1287 aa15.04■□□□□ -0
SMG6-220ENST00000576218 TAS2R42Q7RTR8 314 aa15.04■□□□□ -0
SMG6-220ENST00000576218 OR52K1Q8NGK4 314 aa15.04■□□□□ -0
SMG6-220ENST00000576218 OR10G6Q8NH81 332 aa15.04■□□□□ -0
SMG6-220ENST00000576218 WDR36Q8NI36 951 aaKnown RBP15.04■□□□□ -0
SMG6-220ENST00000576218 SH3KBP1Q96B97 665 aa15.04■□□□□ -0
SMG6-220ENST00000576218 PBKQ96KB5 322 aa15.04■□□□□ -0
SMG6-220ENST00000576218 DNAJC1Q96KC8 554 aaKnown RBP15.04■□□□□ -0
SMG6-220ENST00000576218 ARNT2Q9HBZ2 717 aa15.04■□□□□ -0
SMG6-220ENST00000576218 PRDM8Q9NQV8 689 aa15.04■□□□□ -0
SMG6-220ENST00000576218 WDR70Q9NW82 654 aa15.04■□□□□ -0
SMG6-220ENST00000576218 SMOXQ9NWM0 555 aa15.04■□□□□ -0
SMG6-220ENST00000576218 DKK4Q9UBT3 224 aa15.04■□□□□ -0
SMG6-220ENST00000576218 FAM8A1Q9UBU6 413 aa15.04■□□□□ -0
SMG6-220ENST00000576218 ENTPD2Q9Y5L3 495 aa15.04■□□□□ -0
SMG6-220ENST00000576218 MYLKQ15746 1914 aa15.04■□□□□ -0
SMG6-220ENST00000576218 GOLGA6L10A0A0M3HER8 536 aa15.03■□□□□ -0
SMG6-220ENST00000576218 SRRM3A6NNA2 597 aaPredicted RBP15.03■□□□□ -0
SMG6-220ENST00000576218 CCL22O00626 93 aa15.03■□□□□ -0
SMG6-220ENST00000576218 CASC3O15234 703 aaKnown RBP15.03■□□□□ -0
SMG6-220ENST00000576218 RRP8O43159 456 aaKnown RBP15.03■□□□□ -0
SMG6-220ENST00000576218 DUX1O43812 170 aa15.03■□□□□ -0
SMG6-220ENST00000576218 CPNE6O95741 557 aa15.03■□□□□ -0
SMG6-220ENST00000576218 VIPP01282 170 aa15.03■□□□□ -0
SMG6-220ENST00000576218 JMJD7P0C870 316 aa15.03■□□□□ -0
SMG6-220ENST00000576218 KHDC1Q4VXA5 237 aaKnown RBP15.03■□□□□ -0
SMG6-220ENST00000576218 FNBP1LQ5T0N5 605 aa15.03■□□□□ -0
SMG6-220ENST00000576218 TMEM220Q6QAJ8 160 aa15.03■□□□□ -0
SMG6-220ENST00000576218 C4orf22Q6V702 233 aa15.03■□□□□ -0
SMG6-220ENST00000576218 LRRC69Q6ZNQ3 347 aa15.03■□□□□ -0
SMG6-220ENST00000576218 USP53Q70EK8 1073 aa15.03■□□□□ -0
SMG6-220ENST00000576218 SNX20Q7Z614 316 aa15.03■□□□□ -0
SMG6-220ENST00000576218 PRUNE1Q86TP1 453 aa15.03■□□□□ -0
SMG6-220ENST00000576218 AMZ2Q86W34 360 aa15.03■□□□□ -0
SMG6-220ENST00000576218 C17orf82Q86X59 251 aaPredicted RBP15.03■□□□□ -0
SMG6-220ENST00000576218 ZNF761Q86XN6 746 aaPredicted RBP15.03■□□□□ -0
SMG6-220ENST00000576218 SLC35F6Q8N357 371 aa15.03■□□□□ -0
SMG6-220ENST00000576218 SFRP1Q8N474 314 aa15.03■□□□□ -0
SMG6-220ENST00000576218 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.03■□□□□ -0
SMG6-220ENST00000576218 CXorf40BQ96DE9 158 aa15.03■□□□□ -0
SMG6-220ENST00000576218 ZNF514Q96K75 400 aaPredicted RBP15.03■□□□□ -0
SMG6-220ENST00000576218 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.03■□□□□ -0
SMG6-220ENST00000576218 KCNF1Q9H3M0 494 aa15.03■□□□□ -0
SMG6-220ENST00000576218 FAM96AQ9H5X1 160 aa15.03■□□□□ -0
SMG6-220ENST00000576218 RDH14Q9HBH5 336 aa15.03■□□□□ -0
SMG6-220ENST00000576218 THSD1Q9NS62 852 aa15.03■□□□□ -0
SMG6-220ENST00000576218 TMPRSS11EQ9UL52 423 aa15.03■□□□□ -0
SMG6-220ENST00000576218 ARHGEF17Q96PE2 2063 aaPredicted RBP15.02■□□□□ -0
SMG6-220ENST00000576218 HEATR9A2RTY3 570 aa15.02■□□□□ -0
SMG6-220ENST00000576218 PGRMC1O00264 195 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 PPM1DO15297 605 aa15.02■□□□□ -0
SMG6-220ENST00000576218 LDB2O43679 373 aa15.02■□□□□ -0
SMG6-220ENST00000576218 EML2O95834 649 aa15.02■□□□□ -0
SMG6-220ENST00000576218 ZSCAN5DPP0CG00 497 aa15.02■□□□□ -0
SMG6-220ENST00000576218 RPL10P27635 214 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 FASLGP48023 281 aa15.02■□□□□ -0
SMG6-220ENST00000576218 KCNJ1P48048 391 aa15.02■□□□□ -0
SMG6-220ENST00000576218 LSSP48449 732 aa15.02■□□□□ -0
SMG6-220ENST00000576218 TERF1P54274 439 aa15.02■□□□□ -0
SMG6-220ENST00000576218 DRG2P55039 364 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 GPLD1P80108 840 aa15.02■□□□□ -0
SMG6-220ENST00000576218 B4GALNT1Q00973 533 aa15.02■□□□□ -0
SMG6-220ENST00000576218 EIF3IQ13347 325 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 SKIDA1Q1XH10 827 aa15.02■□□□□ -0
SMG6-220ENST00000576218 CCDC38Q502W7 563 aa15.02■□□□□ -0
SMG6-220ENST00000576218 NKAIN2Q5VXU1 208 aa15.02■□□□□ -0
SMG6-220ENST00000576218 DRICH1Q6PGQ1 229 aaPredicted RBP15.02■□□□□ -0
SMG6-220ENST00000576218 IYDQ6PHW0 289 aa15.02■□□□□ -0
SMG6-220ENST00000576218 RAB11FIP2Q7L804 512 aa15.02■□□□□ -0
SMG6-220ENST00000576218 ZNF438Q7Z4V0 828 aa15.02■□□□□ -0
SMG6-220ENST00000576218 B3GNT8Q7Z7M8 397 aa15.02■□□□□ -0
SMG6-220ENST00000576218 JAMLQ86YT9 394 aa15.02■□□□□ -0
SMG6-220ENST00000576218 KLHDC8BQ8IXV7 354 aa15.02■□□□□ -0
SMG6-220ENST00000576218 FBXO39Q8N4B4 442 aa15.02■□□□□ -0
SMG6-220ENST00000576218 RASGEF1AQ8N9B8 481 aa15.02■□□□□ -0
SMG6-220ENST00000576218 PPHLN1Q8NEY8 458 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 STYXQ8WUJ0 223 aa15.02■□□□□ -0
SMG6-220ENST00000576218 HEXDCQ8WVB3 486 aa15.02■□□□□ -0
SMG6-220ENST00000576218 LIN37Q96GY3 246 aaPredicted RBP15.02■□□□□ -0
SMG6-220ENST00000576218 COPS8Q99627 209 aa15.02■□□□□ -0
SMG6-220ENST00000576218 SARS2Q9NP81 518 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 SLC23A2Q9UGH3 650 aa15.02■□□□□ -0
SMG6-220ENST00000576218 DRG1Q9Y295 367 aaKnown RBP15.02■□□□□ -0
SMG6-220ENST00000576218 USP24Q9UPU5 2620 aa15.01□□□□□ -0.01
SMG6-220ENST00000576218 GAPDHSO14556 408 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms