RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 LINGO1Q96FE5 620 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 C9orf16Q9BUW7 83 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 TRIM8Q9BZR9 551 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ALG2Q9H553 416 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ELAC1Q9H777 363 aaKnown RBP8.86□□□□□ -0.99
NCBP3-204ENST00000574911 C8orf4Q9NR00 106 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 LEF1Q9UJU2 399 aaPredicted RBP8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ASB1Q9Y576 335 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ST14Q9Y5Y6 855 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 GBF1Q92538 1859 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 FAM149AA5PLN7 773 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 CCDC154A6NI56 674 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 H7C0S8 307 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 E2F3O00716 465 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 SNX2O60749 519 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 RASAL1O95294 804 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 RHOCP08134 193 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 FCGR1AP12314 374 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 PCSK6P29122 969 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 IL12AP29459 219 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 GATMP50440 423 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 POLR2JP52435 117 aaKnown RBP8.86□□□□□ -0.99
NCBP3-204ENST00000574911 IL2P60568 153 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 CAP1Q01518 475 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 MERTKQ12866 999 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 FXNQ16595 210 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 SLC36A3Q495N2 470 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 KCTD21Q4G0X4 260 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 RABL3Q5HYI8 236 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 SCIMPQ6UWF3 145 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 CHST9Q7L1S5 443 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 TAS1R1Q7RTX1 841 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 RNF180Q86T96 592 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 FAM47BQ8NA70 645 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 DNAJB14Q8TBM8 379 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 DIS3LQ8TF46 1054 aaKnown RBP8.86□□□□□ -0.99
NCBP3-204ENST00000574911 TMIGD2Q96BF3 282 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ZNF382Q96SR6 550 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ACOX2Q99424 681 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 OCEL1Q9H607 264 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 PFDN4Q9NQP4 134 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 SMOXQ9NWM0 555 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 TUBA8Q9NY65 449 aaPredicted RBP8.86□□□□□ -0.99
NCBP3-204ENST00000574911 ATXN10Q9UBB4 475 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 PCDHGC4Q9Y5F7 938 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 COMMD10Q9Y6G5 202 aa8.86□□□□□ -0.99
NCBP3-204ENST00000574911 FAM234BA2RU67 622 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ANKRD66B4E2M5 251 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 PFDN6O15212 129 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 BAIAP3O94812 1187 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 KLKB1P03952 638 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 C7P10643 843 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 UMPSP11172 480 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 MTHFD1P11586 935 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ELNP15502 786 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 TM4SF4P48230 202 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CDK9P50750 372 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ADARP55265 1226 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ERVPABLB-1P60509 514 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 EMX2Q04743 252 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 C6orf136Q5SQH8 315 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 DENND1CQ8IV53 801 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CPNE9Q8IYJ1 553 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 KIAA2013Q8IYS2 634 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 KCNJ9Q92806 393 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 PLD4Q96BZ4 506 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 PLEKHG4BQ96PX9 1271 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 KCTD14Q9BQ13 255 aaPredicted RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ADI1Q9BV57 179 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ADGRE3Q9BY15 652 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 P2RY12Q9H244 342 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CWH43Q9H720 699 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 RIC8BQ9NVN3 520 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 NUDT4Q9NZJ9 180 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 RSL24D1Q9UHA3 163 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 EIF2B4Q9UI10 523 aaKnown RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 GRXCR2A6NFK2 248 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 TRIM64A6NGJ6 449 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 INPP4BO15327 924 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 TMCC1O94876 653 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 OR4F21O95013 312 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CD160O95971 181 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 C1RP00736 705 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 NPPAP01160 153 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 RFC2P35250 354 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 PTGER3P43115 390 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CLCN7P51798 805 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 RPS6KA3P51812 740 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 TRAF2Q12933 501 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ZNF177Q13360 481 aaPredicted RBP8.85□□□□□ -0.99
NCBP3-204ENST00000574911 PTPRRQ15256 657 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 CYP51A1Q16850 503 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ZRANB3Q5FWF4 1079 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 TMTC4Q5T4D3 741 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 NANOGP8Q6NSW7 305 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 NCEH1Q6PIU2 408 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 Q6ZSR9 355 aa8.85□□□□□ -0.99
NCBP3-204ENST00000574911 ARHGAP22Q7Z5H3 698 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms