RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MYO15AQ9UKN7 3530 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 TCRBV9S1A1TA0A576 114 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 QSOX1O00391 747 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 CHUKO15111 745 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 DNAJC6O75061 913 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 NDUFS3O75489 264 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 FAM153BP0C7A2 387 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 ZNF8P17098 575 aaPredicted RBP16.88■□□□□ 0.29
NUP88-210ENST00000574867 ENGP17813 658 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 HK3P52790 923 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 FAM153CQ494X1 144 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 TCEAL6Q6IPX3 200 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 GALNT13Q8IUC8 556 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 PHACTR4Q8IZ21 702 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 CDKL2Q92772 493 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 TCEAL3Q969E4 200 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 IARS2Q9NSE4 1012 aaKnown RBP16.88■□□□□ 0.29
NUP88-210ENST00000574867 MOSPD1Q9UJG1 213 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 RAB21Q9UL25 225 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 SUFUQ9UMX1 484 aa16.88■□□□□ 0.29
NUP88-210ENST00000574867 LNP1A1A4G5 178 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 F8W8V4 182 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 AP2A2O94973 939 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 ATP1B2P14415 290 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 SLC1A2P43004 574 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 POLD2P49005 469 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 ATXN3P54252 364 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 HNRNPKP61978 463 aaKnown RBP eCLIP16.87■□□□□ 0.29
NUP88-210ENST00000574867 B4GALNT1Q00973 533 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 KYNUQ16719 465 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 HLA-BQ31612 363 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 ZNF648Q5T619 568 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 GALNT7Q86SF2 657 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 LRRC6Q86X45 466 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 HID1Q8IV36 788 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 TSACCQ96A04 125 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 SLC13A1Q9BZW2 595 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 CARS2Q9HA77 564 aaKnown RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 CYP4F12Q9HCS2 524 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 MRPL40Q9NQ50 206 aaKnown RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 NSMCE4AQ9NXX6 385 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 APOBEC3BQ9UH17 382 aaKnown RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 RAPGEFL1Q9UHV5 662 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 FBXO5Q9UKT4 447 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 GPR34Q9UPC5 381 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 TNFP01375 233 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 JUNDP17535 347 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 RXRGP48443 463 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 PMS2P54278 862 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 EMBQ6PCB8 327 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 MARK2Q7KZI7 788 aaKnown RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 LDB1Q86U70 411 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 LRRTM4Q86VH4 590 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 DENND6AQ8IWF6 608 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 RASGEF1AQ8N9B8 481 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 C2CD4AQ8NCU7 369 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 OR2M4Q96R27 311 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 PHOX2BQ99453 314 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 BOCQ9BWV1 1114 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 TXLNGYQ9BZA5 131 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 CLPBQ9H078 707 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 GAREM1Q9H706 876 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 FSCN3Q9NQT6 498 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 PNMA8BQ9ULN7 279 aaPredicted RBP16.87■□□□□ 0.29
NUP88-210ENST00000574867 ADAMTS9Q9P2N4 1935 aa16.87■□□□□ 0.29
NUP88-210ENST00000574867 PRMT5O14744 637 aaPredicted RBP16.86■□□□□ 0.29
NUP88-210ENST00000574867 GRID2O43424 1007 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 RPS3P23396 243 aaKnown RBP eCLIP16.86■□□□□ 0.29
NUP88-210ENST00000574867 GNPDA1P46926 289 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 ADARP55265 1226 aaKnown RBP16.86■□□□□ 0.29
NUP88-210ENST00000574867 LRP8Q14114 963 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 BCL7AQ4VC05 210 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 PYCR3Q53H96 274 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 TEDDM1Q5T9Z0 273 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 SLC26A11Q86WA9 606 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 TRAPPC5Q8IUR0 188 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 LPGAT1Q92604 370 aa16.86■□□□□ 0.29
NUP88-210ENST00000574867 TRNAU1APQ9NX07 287 aaKnown RBP16.86■□□□□ 0.29
NUP88-210ENST00000574867 A0A1B0GTQ1 180 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 FAM159BA6NKW6 160 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 KMOO15229 486 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 ACSL3O95573 720 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 PRLHRP49683 370 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 CCT8P50990 548 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 CTBP1Q13363 440 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 NAB1Q13506 487 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 SF3A2Q15428 464 aaKnown RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 KCTD16Q68DU8 428 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 ASCL5Q7RTU5 278 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 RD3Q7Z3Z2 195 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 FBF1Q8TES7 1133 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 GTPBP2Q9BX10 602 aaKnown RBP16.85■□□□□ 0.29
NUP88-210ENST00000574867 FUT8Q9BYC5 575 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 ZNHIT2Q9UHR6 403 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 KLF15Q9UIH9 416 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 PCDHB1Q9Y5F3 818 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 DMDP11532 3685 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 KLHL33A6NCF5 533 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 OR2AG2A6NM03 316 aa16.85■□□□□ 0.29
NUP88-210ENST00000574867 OR1I1O60431 355 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms