RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ACRV1P26436 265 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 BMPR1AP36894 532 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 SPAM1P38567 509 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 DPP6P42658 865 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 NAA20P61599 178 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 FPGSQ05932 587 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 RBBP7Q16576 425 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 KIF19Q2TAC6 998 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ASTLQ6HA08 431 aaPredicted RBP13.9□□□□□ -0.18
VPS33B-208ENST00000574755 RNF148Q8N7C7 305 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 ISG20Q96AZ6 181 aaKnown RBP13.9□□□□□ -0.18
VPS33B-208ENST00000574755 TUBGCP3Q96CW5 907 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 HGH1Q9BTY7 390 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 TUBB1Q9H4B7 451 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 CHD7Q9P2D1 2997 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 TMCO1Q9UM00 188 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 BTRCQ9Y297 605 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 SLC4A7Q9Y6M7 1214 aa13.9□□□□□ -0.18
VPS33B-208ENST00000574755 CXorf51AA0A1B0GTR3 108 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SNRPB2P08579 225 aaKnown RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 LINC00032P0C843 101 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ACADSP16219 412 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 RPS3P23396 243 aaKnown RBP eCLIP13.89□□□□□ -0.194e-6■■■■□ 22.8
VPS33B-208ENST00000574755 CCNHP51946 323 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 EPHA5P54756 1037 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 CHRNA6Q15825 494 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SLC5A9Q2M3M2 681 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 GRAMD4Q6IC98 578 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 USP45Q70EL2 814 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 OR9I1Q8NGQ6 314 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF483Q8TF39 744 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SCRN2Q96FV2 425 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 TUBGCP5Q96RT8 1024 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SUV39H2Q9H5I1 410 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 GIMAP2Q9UG22 337 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 EIF2B4Q9UI10 523 aaKnown RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 TIMM22Q9Y584 194 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 MOSPD3O75425 235 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SLC25A14O95258 325 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 TRIM16O95361 564 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ESRRBO95718 433 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 CHRM1P11229 460 aaPredicted RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 PABPC1P11940 636 aaKnown RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 PRDX3P30048 256 aaKnown RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ATP4BP51164 291 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ECT2LQ008S8 904 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ZNF423Q2M1K9 1284 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 LYPLAL1Q5VWZ2 237 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 LRRC66Q68CR7 880 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 REP15Q6BDI9 236 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 PAOXQ6QHF9 649 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 CRTC1Q6UUV9 634 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 TPRG1Q6ZUI0 275 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 ADAMTSL2Q86TH1 951 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 IRF7Q92985 503 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 PDLIM5Q96HC4 596 aaKnown RBP13.89□□□□□ -0.19
VPS33B-208ENST00000574755 LYSMD1Q96S90 227 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SLC25A23Q9BV35 468 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 TMEM106CQ9BVX2 250 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 CACNA2D2Q9NY47 1150 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 POLG2Q9UHN1 485 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 SLCO3A1Q9UIG8 710 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 PRSS21Q9Y6M0 314 aa13.89□□□□□ -0.19
VPS33B-208ENST00000574755 PIKFYVEQ9Y2I7 2098 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 TRBV5-4A0A0C4DH59 114 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 E2F3O00716 465 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CHEK2O96017 543 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 UGT2B4P06133 528 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 TYRP14679 529 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 MSX2P35548 267 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 RGS4P49798 205 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CEACAM7Q14002 265 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 FLOT2Q14254 428 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 GRB7Q14451 532 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 GPR33Q49SQ1 333 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 DHDDSQ86SQ9 333 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 SYVN1Q86TM6 617 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 KBTBD6Q86V97 674 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 PCDH20Q8N6Y1 951 aaKnown RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 GPR26Q8NDV2 337 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 OR56A4Q8NGH8 313 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 SP7Q8TDD2 431 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 VOPP1Q96AW1 172 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ECHDC3Q96DC8 303 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 SPHK2Q9NRA0 654 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 NUDT4Q9NZJ9 180 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ADA2Q9NZK5 511 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ASB1Q9Y576 335 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 MYO7AQ13402 2215 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 FBP2O00757 339 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 HGFP14210 728 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 XRCC1P18887 633 aaPredicted RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ME2P23368 584 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 ACADVLP49748 655 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CLNS1AP54105 237 aaKnown RBP13.88□□□□□ -0.19
VPS33B-208ENST00000574755 NME5P56597 212 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CMPK2Q5EBM0 449 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 CARD16Q5EG05 197 aa13.88□□□□□ -0.19
VPS33B-208ENST00000574755 TMEM240Q5SV17 173 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms