RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ZRANB3Q5FWF4 1079 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 C6orf132Q5T0Z8 1188 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 RNASEH2BQ5TBB1 312 aaKnown RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 LYPLAL1Q5VWZ2 237 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 AFTPHQ6ULP2 937 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 MARK2Q7KZI7 788 aaKnown RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 LRRTM4Q86VH4 590 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 JAMLQ86YT9 394 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 PNPLA1Q8N8W4 532 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 NAT8LQ8N9F0 302 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 BBOF1Q8ND07 529 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 HNRNPLLQ8WVV9 542 aaKnown RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 DCUN1D1Q96GG9 259 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 ZNF514Q96K75 400 aaPredicted RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 OR2AG1Q9H205 316 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 SUDS3Q9H7L9 328 aaPredicted RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 SAMD15Q9P1V8 674 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 GPR34Q9UPC5 381 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 DNMT3AQ9Y6K1 912 aaPredicted RBP10.9□□□□□ -0.66
CHD3-216ENST00000573936 BPTFQ12830 3046 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 CABIN1Q9Y6J0 2220 aa10.9□□□□□ -0.66
CHD3-216ENST00000573936 SDR42E2A6NKP2 422 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 TRIM38O00635 465 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 CHUKO15111 745 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 TTI1O43156 1089 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 TMEM63AO94886 807 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 VCLP18206 1134 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 PAMP19021 973 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 MGAT1P26572 445 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 AKT1P31749 480 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 CLCNKAP51800 687 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 PRAMEP78395 509 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 DAB2P98082 770 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 CTBSQ01459 385 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ACVR1Q04771 509 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ILKQ13418 452 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 MORF4L2Q15014 288 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 NR0B2Q15466 257 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 PROX2Q3B8N5 592 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 GPRC6AQ5T6X5 926 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ANKRD22Q5VYY1 191 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 IZUMO3Q5VZ72 239 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 KCTD16Q68DU8 428 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ZNF534Q76KX8 674 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 CHST15Q7LFX5 561 aaPredicted RBP10.89□□□□□ -0.67
CHD3-216ENST00000573936 TAS2R42Q7RTR8 314 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 CAND1Q86VP6 1230 aaKnown RBP10.89□□□□□ -0.67
CHD3-216ENST00000573936 MNS1Q8NEH6 495 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 FAM46DQ8NEK8 389 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 OR6C4Q8NGE1 309 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ADAMTS14Q8WXS8 1223 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 HDAC10Q969S8 669 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 SGSM3Q96HU1 749 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 APOLD1Q96LR9 279 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 SERPINB12Q96P63 405 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 COPS8Q99627 209 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 KIFC1Q9BW19 673 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 BOCQ9BWV1 1114 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ARFGAP3Q9NP61 516 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 CHRAC1Q9NRG0 131 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ZDHHC3Q9NYG2 299 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 ANAPC5Q9UJX4 755 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 TMPRSS11EQ9UL52 423 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 SOX13Q9UN79 622 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 PCDHGA1Q9Y5H4 931 aa10.89□□□□□ -0.67
CHD3-216ENST00000573936 FLNBO75369 2602 aaKnown RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 ADAMTS20P59510 1910 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 TRBV5-4A0A0C4DH59 114 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 CCDC78A2IDD5 438 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 KLHL33A6NCF5 533 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 EFCAB8A8MWE9 144 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 F8W8V4 182 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 MTX2O75431 263 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 CELA2BP08218 269 aaPredicted RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 CKMT1AP12532 417 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 SLC2A4P14672 509 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 ZNF7P17097 686 aaPredicted RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 ACP1P24666 158 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 ACRV1P26436 265 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 ACTR1BP42025 376 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 ACTR1AP61163 376 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 C2orf54Q08AI8 447 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 SOWAHCQ53LP3 525 aaPredicted RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 FASTKD1Q53R41 847 aaKnown RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 DNAJC21Q5F1R6 531 aaKnown RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 ZNF648Q5T619 568 aaPredicted RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 CASC4Q6P4E1 433 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 OGFOD3Q6PK18 319 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 CERS6Q6ZMG9 384 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 CCNI2Q6ZMN8 369 aaPredicted RBP10.88□□□□□ -0.67
CHD3-216ENST00000573936 SERPINA9Q86WD7 417 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 NRROSQ86YC3 692 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 NXPE1Q8N323 547 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 ARL10Q8N8L6 244 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 OR13J1Q8NGT2 312 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 OR6P1Q8NGX9 317 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 OR4L1Q8NH43 312 aa10.88□□□□□ -0.67
CHD3-216ENST00000573936 CCL4L1Q8NHW4 92 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms