RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 KIAA1328Q86T90 577 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TMTC1Q8IUR5 882 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 IL22RA1Q8N6P7 574 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TADA1Q96BN2 335 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 CXorf40BQ96DE9 158 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 SGF29Q96ES7 293 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 MRFAP1L1Q96HT8 127 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 MRGPRX2Q96LB1 330 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 VPS35Q96QK1 796 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 PANX2Q96RD6 677 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 FCRL5Q96RD9 977 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TIMM29Q9BSF4 260 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TBC1D10AQ9BXI6 508 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 ZCCHC2Q9C0B9 1178 aaKnown RBP9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TRABDQ9H4I3 376 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 CPNE7Q9UBL6 633 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TRIM10Q9UDY6 481 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 TRHDEQ9UKU6 1024 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 COL6A6A6NMZ7 2263 aa9.52□□□□□ -0.89
NPLOC4-212ENST00000573328 GLYATL1P3A0A0U1RQE8 302 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 LOC285095A0A1B0GVY8 99 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 LILRA5A6NI73 299 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 PJA2O43164 708 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 EFSO43281 561 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 BUD23O43709 281 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 AMD1P17707 334 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 IDSP22304 550 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 RPL10P27635 214 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 RBL1P28749 1068 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 PBLDP30039 288 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 AKT1P31749 480 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 CTNNA1P35221 906 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 HMGCLP35914 325 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 HALP42357 657 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 EPHA4P54764 986 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 GEMP55040 296 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 RAB15P59190 212 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 COPS2P61201 443 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 OTUD4Q01804 1114 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 XRCC4Q13426 336 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 ITGA9Q13797 1035 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 SLC1A5Q15758 541 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 DCAF12Q5T6F0 453 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 ZDHHC20Q5W0Z9 365 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 WDR74Q6RFH5 385 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 PCSK4Q6UW60 755 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 CDKL3Q8IVW4 592 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 TTC30BQ8N4P2 665 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 ACRBPQ8NEB7 543 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 ACTL9Q8TC94 416 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 SNRNP27Q8WVK2 155 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 TTC9Q92623 222 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 PMEPA1Q969W9 287 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 OXNAD1Q96HP4 312 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 CALR3Q96L12 384 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 FAM118BQ9BPY3 351 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 FICDQ9BVA6 458 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 OSBPL8Q9BZF1 889 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 GBA3Q9H227 469 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 EPB41L1Q9H4G0 881 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 C10orf88Q9H8K7 445 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 OCIAD1Q9NX40 245 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 SSUH2Q9Y2M2 353 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 B3GALT1Q9Y5Z6 326 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 ADGRG1Q9Y653 693 aa9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 EPN1Q9Y6I3 576 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-212ENST00000573328 CCDC66A2RUB6 948 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 A6NCN8 305 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 RCCD1A6NED2 376 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 CHUKO15111 745 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 STX7O15400 261 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 KCNN4O15554 427 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 GPR39O43194 453 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 RASSF9O75901 435 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 ANXA9O76027 345 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 UBXN7O94888 489 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 RBP3P10745 1247 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 TYRP1P17643 537 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 PSMB4P28070 264 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 CLCNKAP51800 687 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 DRG2P55039 364 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 RWDD2BP57060 319 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 EIF3EP60228 445 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 TMEM115Q12893 351 aaPredicted RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 SQSTM1Q13501 440 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 CHRNA6Q15825 494 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 KHDC1Q4VXA5 237 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 LDLRAP1Q5SW96 308 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 ANKS6Q68DC2 871 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 DARS2Q6PI48 645 aaKnown RBP9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 CEACAM20Q6UY09 585 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 TMEM26Q6ZUK4 368 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF605Q86T29 641 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 PLXDC1Q8IUK5 500 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 ZNF843Q8N446 348 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 BRSK1Q8TDC3 778 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 LRRC45Q96CN5 670 aa9.5□□□□□ -0.89
NPLOC4-212ENST00000573328 WBP1Q96G27 269 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms