RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 SLC25A41Q8N5S1 370 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 CCDC97Q96F63 343 aaPredicted RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.07■□□□□ 0.32
SMG6-212ENST00000573153 ZNF624Q9P2J8 865 aaPredicted RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 RSPH14Q9UHP6 348 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 PACSIN2Q9UNF0 486 aaPredicted RBP17.07■□□□□ 0.32
SMG6-212ENST00000573153 CAPN6Q9Y6Q1 641 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 BSNQ9UPA5 3926 aa17.07■□□□□ 0.32
SMG6-212ENST00000573153 TEX51A0A1B0GUA7 166 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.06■□□□□ 0.32
SMG6-212ENST00000573153 HGSO14964 777 aaPredicted RBP17.06■□□□□ 0.32
SMG6-212ENST00000573153 BUD23O43709 281 aaKnown RBP17.06■□□□□ 0.32
SMG6-212ENST00000573153 PPFIA2O75334 1257 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 WT1P19544 449 aaPredicted RBP17.06■□□□□ 0.32
SMG6-212ENST00000573153 MPSTP25325 297 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 PSMB4P28070 264 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 CTSCP53634 463 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 GEMP55040 296 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 TMPRSS3P57727 454 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 GPLD1P80108 840 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 HHEXQ03014 270 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 ANKRD20A2Q5SQ80 823 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 PHF19Q5T6S3 580 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 ANKRD20A1Q5TYW2 823 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 ANKRD20A3Q5VUR7 823 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 ARHGAP22Q7Z5H3 698 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 TTC13Q8NBP0 860 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 USP7Q93009 1102 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 SPATA13Q96N96 652 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 PPP1R2P1Q96PQ5 205 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 TIMM29Q9BSF4 260 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 TSGA10Q9BZW7 698 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 B3GNT4Q9C0J1 378 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 KLC4Q9NSK0 619 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 SMOXQ9NWM0 555 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 KCNK4Q9NYG8 393 aa17.06■□□□□ 0.32
SMG6-212ENST00000573153 KIR2DS5A0A0G2JLQ3 304 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 A0A0G2JNG1 304 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 TCRBV7S2A1N4TA0A589 114 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 KIR2DS3K7RE56 304 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 ZW10O43264 779 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 SGTAO43765 313 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 VEGFDO43915 354 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A9O60656 530 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 PRB1P04280 392 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 ZNF7P17097 686 aaPredicted RBP17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A6P19224 532 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A1P22309 533 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A4P22310 534 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A3P35503 534 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 SLC19A1P41440 591 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 TNNT3P45378 269 aaPredicted RBP17.05■□□□□ 0.32
SMG6-212ENST00000573153 XIAPP98170 497 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 TRA2AQ13595 282 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMG6-212ENST00000573153 COL9A2Q14055 689 aaPredicted RBP17.05■□□□□ 0.32
SMG6-212ENST00000573153 KIR2DS5Q14953 304 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 CHRNA6Q15825 494 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 PLA2G4EQ3MJ16 856 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 KCTD11Q693B1 232 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 TMEM71Q6P5X7 295 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 ZFAND4Q86XD8 727 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 DDHD1Q8NEL9 900 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 CCDC110Q8TBZ0 833 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 BLOC1S5Q8TDH9 187 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 CMKLR1Q99788 373 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 C19orf43Q9BQ61 176 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 FICDQ9BVA6 458 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 TBC1D10AQ9BXI6 508 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A7Q9HAW7 530 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A10Q9HAW8 530 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 UGT1A8Q9HAW9 530 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 R3HDM2Q9Y2K5 976 aaKnown RBP17.05■□□□□ 0.32
SMG6-212ENST00000573153 AAR2Q9Y312 384 aaKnown RBP17.05■□□□□ 0.32
SMG6-212ENST00000573153 KCTD3Q9Y597 815 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 PCDHGA3Q9Y5H0 932 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 CFAP46Q8IYW2 2715 aa17.05■□□□□ 0.32
SMG6-212ENST00000573153 GOLGA6L9A6NEM1 432 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 C5orf60A6NFR6 353 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 LILRA5A6NI73 299 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 AGAP14A8MT82 685 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 KCNN4O15554 427 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 ARHGAP6O43182 974 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 STK10O94804 968 aaKnown RBP17.04■□□□□ 0.32
SMG6-212ENST00000573153 FTCDO95954 541 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 JMJD7P0C870 316 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 LIPCP11150 499 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 SPAM1P38567 509 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 EPHA4P54764 986 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 UCNP55089 124 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 VAC14Q08AM6 782 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 TMEM115Q12893 351 aaPredicted RBP17.04■□□□□ 0.32
SMG6-212ENST00000573153 NFATC2Q13469 925 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 ARHGAP40Q5TG30 622 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 DARS2Q6PI48 645 aaKnown RBP17.04■□□□□ 0.32
SMG6-212ENST00000573153 ABRAXAS1Q6UWZ7 409 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 ZNF662Q6ZS27 426 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 LRRTM4Q86VH4 590 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 RASGEF1AQ8N9B8 481 aa17.04■□□□□ 0.32
SMG6-212ENST00000573153 CCDC112Q8NEF3 446 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms