RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 MMP12P39900 470 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 NSG1P42857 185 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 RGS4P49798 205 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 RASSF2P50749 326 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 HERVK_113P63132 956 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 DLX2Q07687 328 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 GRM2Q14416 872 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 E2F5Q15329 346 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TSNQ15631 228 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 CRY1Q16526 586 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ITPRIPL2Q3MIP1 535 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PREPLQ4J6C6 727 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ATP13A5Q4VNC0 1218 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 LRRC73Q5JTD7 316 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 GPRC6AQ5T6X5 926 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 METTL21CQ5VZV1 264 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 SEL1L3Q68CR1 1132 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ERAP2Q6P179 960 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TXNDC11Q6PKC3 985 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PARM1Q6UWI2 310 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 LIPIQ6XZB0 460 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 FRMD7Q6ZUT3 714 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 MTSS1LQ765P7 747 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ASRGL1Q7L266 308 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PARS2Q7L3T8 475 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TECPR1Q7Z6L1 1165 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TTC7BQ86TV6 843 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ALYREFQ86V81 257 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 NRSN1Q8IZ57 195 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 FBXO39Q8N4B4 442 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 AFAP1L2Q8N4X5 818 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TRAM1L1Q8N609 369 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PTGR2Q8N8N7 351 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PIP4K2CQ8TBX8 421 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 MAPK15Q8TD08 544 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 LKAAEAR1Q8TD35 194 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 EEF1AKMT1Q8WVE0 214 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 SUSD6Q92537 303 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 EXT2Q93063 718 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 FUBP1Q96AE4 644 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 KLHL29Q96CT2 875 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PHF21BQ96EK2 531 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 CCDC97Q96F63 343 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PRR11Q96HE9 360 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 FAR2Q96K12 515 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 MSLNLQ96KJ4 702 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PANX3Q96QZ0 392 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 FAM129BQ96TA1 746 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 COPS8Q99627 209 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 CCDC28BQ9BUN5 200 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TRMT61BQ9BVS5 477 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 CCDC106Q9BWC9 280 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 C1QTNF3Q9BXJ4 246 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ERVK-6Q9BXR3 956 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 NMUR2Q9GZQ4 415 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 FAM83DQ9H4H8 585 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ZNF576Q9H609 170 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 COG4Q9H9E3 785 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 SARS2Q9NP81 518 aaKnown RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 ARL8BQ9NVJ2 186 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 GTSE1Q9NYZ3 720 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 THAP10Q9P2Z0 257 aaPredicted RBP6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 SUN2Q9UH99 717 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 LNPEPQ9UIQ6 1025 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 SARDHQ9UL12 918 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 TMPRSS11EQ9UL52 423 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 PPM1HQ9ULR3 514 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 RNF112Q9ULX5 631 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 CHD7Q9P2D1 2997 aa6.07□□□□□ -1.44
TRAPPC1-204ENST00000571947 BPTFQ12830 3046 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 TRPC5OSA6NMA1 111 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 CAPN14A8MX76 684 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 SUPT3HB4E1H0 165 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 C1QTNF3-AMACRE9PGA6 284 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 H0Y858 1186 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 H0YHG0 523 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 EIF3FO00303 357 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 ARNTLO00327 626 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 BTN3A1O00481 513 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 KPNA3O00505 521 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 NPC1O15118 1278 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 SPINT1O43278 529 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 MAGEC1O60732 1142 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 DIAPH2O60879 1101 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 SUPT3HO75486 399 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 SNRNP200O75643 2136 aaKnown RBP6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 SUPT7LO94864 414 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 KAT7O95251 611 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 TRIM16O95361 564 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 CBX6O95503 412 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 RPS17P08708 135 aaKnown RBP6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 OR56A5P0C7T3 313 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 CBSLP0DN79 551 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 GFAPP14136 432 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 HNRNPLP14866 589 aaKnown RBP eCLIP6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 GM2AP17900 193 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 ITGB6P18564 788 aa6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 POU3F3P20264 500 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC1-204ENST00000571947 CALB2P22676 271 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms