RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 USP7Q93009 1102 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 CALR3Q96L12 384 aaKnown RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 PLEKHG4BQ96PX9 1271 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 FCRL5Q96RD9 977 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 HEMGNQ9BXL5 484 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 FSD1LQ9BXM9 530 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 TRABDQ9H4I3 376 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 KLC4Q9NSK0 619 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 FOXJ2Q9P0K8 574 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 RSPH14Q9UHP6 348 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 PCDHB11Q9Y5F2 797 aa12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 EPN1Q9Y6I3 576 aaPredicted RBP12.21□□□□□ -0.45
CTDNEP1-205ENST00000570828 AHCTF1Q8WYP5 2266 aa12.21□□□□□ -0.46
CTDNEP1-205ENST00000570828 LOC285095A0A1B0GVY8 99 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 A6NCN8 305 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 OR5K4A6NMS3 321 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 C9orf172C9J069 976 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 H7C0C1 242 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 AURKAO14965 403 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 KMOO15229 486 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 VEGFDO43915 354 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 EPOP01588 193 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 PRB1P04280 392 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 CCL4P13236 92 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 HLA-DPA1P20036 260 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 MPSTP25325 297 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 CTNNA2P26232 953 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 CTNNA1P35221 906 aaKnown RBP12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 HMGCLP35914 325 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 CHRNA4P43681 627 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 MAPK9P45984 424 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 ATP5OP48047 213 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 EPHA4P54764 986 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 MPP3Q13368 585 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 XRCC4Q13426 336 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 GTF2H3Q13889 308 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 NOMO1Q15155 1222 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 TGIF1Q15583 401 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 PLA2G4EQ3MJ16 856 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 SIRPB2Q5JXA9 342 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZDHHC20Q5W0Z9 365 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 GLT6D1Q7Z4J2 308 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 ADGRG6Q86SQ4 1221 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 LRRTM4Q86VH4 590 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 SLC25A41Q8N5S1 370 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 GDAP1Q8TB36 358 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 BLOC1S5Q8TDH9 187 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 OXNAD1Q96HP4 312 aaPredicted RBP12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 MRGPRX2Q96LB1 330 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 B3GNT4Q9C0J1 378 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 BPIFA1Q9NP55 256 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 HACD3Q9P035 362 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 TMEM9Q9P0T7 183 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 CPNE7Q9UBL6 633 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 TRHDEQ9UKU6 1024 aa12.2□□□□□ -0.46
CTDNEP1-205ENST00000570828 CFAP46Q8IYW2 2715 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 RCCD1A6NED2 376 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 PDZK1P1A8MUH7 402 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CHUKO15111 745 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 PJA2O43164 708 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 MTX2O75431 263 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CDK14O94921 469 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 AVPP01185 164 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 VCLP18206 1134 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 SPAM1P38567 509 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CETN2P41208 172 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CLCNKAP51800 687 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CFHR1Q03591 330 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 C19orf57Q0VDD7 668 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 SLC1A5Q15758 541 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 MANEAQ5SRI9 462 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 ITPRIPL1Q6GPH6 555 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 WDR74Q6RFH5 385 aaPredicted RBP12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZFAND4Q86XD8 727 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 FAM129CQ86XR2 697 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 TRAPPC5Q8IUR0 188 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 CDKL3Q8IVW4 592 aaPredicted RBP12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 TRIM48Q8IWZ4 208 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 ART4Q93070 314 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 TTC25Q96NG3 672 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 VPS35Q96QK1 796 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 TAAR9Q96RI9 348 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 TIMM29Q9BSF4 260 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 ZCCHC2Q9C0B9 1178 aaKnown RBP12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 GBA3Q9H227 469 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 EPB41L1Q9H4G0 881 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 PRDM8Q9NQV8 689 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 DNAJC16Q9Y2G8 782 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 PKP3Q9Y446 797 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 PCDHA3Q9Y5H8 950 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 KIF26BQ2KJY2 2108 aa12.19□□□□□ -0.46
CTDNEP1-205ENST00000570828 LILRA5A6NI73 299 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 BTNL10A8MVZ5 291 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 STMND1H3BQB6 276 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 ANXA9O76027 345 aa12.18□□□□□ -0.46
CTDNEP1-205ENST00000570828 STK10O94804 968 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms