RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 GPR150Q8NGU9 434 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM45AQ8TCE6 357 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 DTX3LQ8TDB6 740 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC44A1Q8WWI5 657 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 GAB3Q8WWW8 586 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SKA1Q96BD8 255 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 BIRC7Q96CA5 298 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 MTBPQ96DY7 904 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TSPAN17Q96FV3 270 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 HIC2Q96JB3 615 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 VPS39Q96JC1 886 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ELMO2Q96JJ3 720 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TSNARE1Q96NA8 513 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZIM3Q96PE6 472 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 RBBP8Q99708 897 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 C1QTNF1Q9BXJ1 281 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 FUT8Q9BYC5 575 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ROPN1BQ9BZX4 212 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 MIR1-1HGQ9H1L0 117 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 EPB41L4BQ9H329 900 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 RHOJQ9H4E5 214 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 EPHX3Q9H6B9 360 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ROPN1Q9HAT0 212 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZDHHC3Q9NYG2 299 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 MARCH4Q9P2E8 410 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SLC17A6Q9P2U8 582 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 TBK1Q9UHD2 729 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 MOSPD1Q9UJG1 213 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF180Q9UJW8 692 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 OR1A2Q9Y585 309 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 PCDHB1Q9Y5F3 818 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 COMMD10Q9Y6G5 202 aa6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 SPTBN5Q9NRC6 3674 aaKnown RBP6.52□□□□□ -1.37
CTDNEP1-204ENST00000570484 CKAP5Q14008 2032 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TRBV5-4A0A0C4DH59 114 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 FAM95CA0A1B0GW59 222 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 A0A1W2PPC4 97 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PABPN1LA6NDY0 278 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 CXorf49A8MYA2 514 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPR89AB7ZAQ6 455 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 K7ESM1 405 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 GAPDHSO14556 408 aaPredicted RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TOR1BO14657 336 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 VEGFDO43915 354 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A9O60656 530 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 MAGEC1O60732 1142 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 DNAJC6O75061 913 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 MTX2O75431 263 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PIAS1O75925 651 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 RHOBTB1O94844 696 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 AP2A2O94973 939 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 IL2RAP01589 272 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 FTH1P02794 183 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ESR1P03372 595 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 IGHV4-34P06331 123 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ITGA2BP08514 1039 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SNRPAP09012 282 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 GPR89BP0CG08 455 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRSS56P0CW18 603 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 GNSP15586 552 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 GM2AP17900 193 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 VCLP18206 1134 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A6P19224 532 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SAT1P21673 171 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 BCKDHBP21953 392 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A1P22309 533 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A4P22310 534 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 CD27P26842 260 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TEAD1P28347 426 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 FMO4P31512 558 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 CNR2P34972 360 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A3P35503 534 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT1A5P35504 534 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 DPP6P42658 865 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ABCG1P45844 678 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 RABIFP47224 123 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 LEPRP48357 1165 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 EPHA4P54764 986 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 C21orf59P57076 290 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 KIAA1024LP59773 190 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 CREB5Q02930 508 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF844Q08AG5 666 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 DMWDQ09019 674 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 BMPR2Q13873 1038 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PTK2BQ14289 1009 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 FGL2Q14314 439 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 SEMA3AQ14563 771 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 INPP5AQ14642 412 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 USP10Q14694 798 aaKnown RBP6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TEAD4Q15561 434 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 ZNF528Q3MIS6 628 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 TTLL9Q3SXZ7 439 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 UGT3A1Q6NUS8 523 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PNCKQ6P2M8 343 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 PRR23BQ6ZRT6 265 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 RAPH1Q70E73 1250 aa6.51□□□□□ -1.37
CTDNEP1-204ENST00000570484 DET1Q7L5Y6 550 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms