RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 SPAM1P38567 509 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 GEMP55040 296 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RWDD2BP57060 319 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RAB15P59190 212 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DMPKQ09013 629 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 LLGL1Q15334 1064 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ATP13A5Q4VNC0 1218 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ITPRIPL1Q6GPH6 555 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ABRAXAS1Q6UWZ7 409 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RANBP10Q6VN20 620 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RAD9BQ6WBX8 426 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RBM12BQ8IXT5 1001 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RCBTB1Q8NDN9 531 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DDHD1Q8NEL9 900 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ACTL9Q8TC94 416 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 AHCYL2Q96HN2 611 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PPP1R2P1Q96PQ5 205 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 TEFMQ96QE5 360 aaKnown RBP16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 ASPSCR1Q9BZE9 553 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 OSBPL8Q9BZF1 889 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 PRDM8Q9NQV8 689 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 SLC23A2Q9UGH3 650 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 RSPH14Q9UHP6 348 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 DUSP10Q9Y6W6 482 aa16.84■□□□□ 0.29
MAP1LC3B-208ENST00000570189 STMND1H3BQB6 276 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GAPDHSO14556 408 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CDK14O94921 469 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ANKRD34CP0C6C1 535 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 RBL1P28749 1068 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ADRA1AP35348 466 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ARSDP51689 593 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MAPK10P53779 464 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 OTUD4Q01804 1114 aaKnown RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 C19orf57Q0VDD7 668 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TMEM115Q12893 351 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ITGA9Q13797 1035 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KHDC1Q4VXA5 237 aaKnown RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 LDLRAP1Q5SW96 308 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 XKR5Q6UX68 686 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GLT6D1Q7Z4J2 308 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TMEM139Q8IV31 216 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CDKL3Q8IVW4 592 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 HAUS1Q96CS2 278 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 HEMGNQ9BXL5 484 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 FSD1LQ9BXM9 530 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZCCHC2Q9C0B9 1178 aaKnown RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 LACRTQ9GZZ8 138 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ARFGAP3Q9NP61 516 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 POT1Q9NUX5 634 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TMEM9Q9P0T7 183 aa16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 DNMT3AQ9Y6K1 912 aaPredicted RBP16.83■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TOX3O15405 576 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SLC4A1P02730 911 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 C9P02748 559 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ITGB2P05107 769 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 VCLP18206 1134 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CETN2P41208 172 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CHRNA4P43681 627 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TGIF1Q15583 401 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 INSCQ1MX18 579 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF648Q5T619 568 aaPredicted RBP16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TMEM26Q6ZUK4 368 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TXLNBQ8N3L3 684 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 IPMKQ8NFU5 416 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ALG3Q92685 438 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZPBPQ9BS86 351 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 BPIFA1Q9NP55 256 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 FBXO8Q9NRD0 319 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 AAR2Q9Y312 384 aaKnown RBP16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PKP3Q9Y446 797 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PCDHB11Q9Y5F2 797 aa16.82■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GCN1Q92616 2671 aaKnown RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TRBV23OR9-2A0A075B6M9 112 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GLYATL1P3A0A0U1RQE8 302 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GRID2IPA4D2P6 1211 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 KLHL33A6NCF5 533 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 AGAP14A8MT82 685 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 H7C0C1 242 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SNX2O60749 519 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TJP3O95049 919 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 RBP3P10745 1247 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 BRAFP15056 766 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 IDSP22304 550 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SLC19A1P41440 591 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ATP5OP48047 213 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MC2RQ01718 297 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 MSLNQ13421 630 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 NFATC2Q13469 925 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 GTF2H3Q13889 308 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 TAF1AQ15573 450 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ANKRD20A2Q5SQ80 823 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ANKRD20A1Q5TYW2 823 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ANKRD20A3Q5VUR7 823 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 CRTC3Q6UUV7 619 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZFAND4Q86XD8 727 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 ZNF761Q86XN6 746 aaPredicted RBP16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 PLXDC1Q8IUK5 500 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 SLC25A41Q8N5S1 370 aa16.81■□□□□ 0.28
MAP1LC3B-208ENST00000570189 BLOC1S5Q8TDH9 187 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms