RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 FOXK2Q01167 660 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 ACVR1Q04771 509 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 PTK6Q13882 451 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 GTF2H3Q13889 308 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 PPP1R7Q15435 360 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 SKIDA1Q1XH10 827 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 GPR33Q49SQ1 333 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 C14orf28Q4W4Y0 310 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 CRTC3Q6UUV7 619 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 DHRS13Q6UX07 377 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 EFL1Q7Z2Z2 1120 aaKnown RBP9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 C11orf96Q7Z7L8 435 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 C17orf82Q86X59 251 aaPredicted RBP9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 ZNF547Q8IVP9 402 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 KLHL7Q8IXQ5 586 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 NXPE1Q8N323 547 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 CHCHD4Q8N4Q1 142 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 RASGEF1AQ8N9B8 481 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 MCUQ8NE86 351 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 PPHLN1Q8NEY8 458 aaKnown RBP9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 IFI44Q8TCB0 444 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 ZDHHC1Q8WTX9 485 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 PEX13Q92968 403 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 NAT6Q93015 286 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 ULK4Q96C45 1275 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 C16orf45Q96MC5 204 aaPredicted RBP9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 TTC25Q96NG3 672 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 RUNDC3BQ96NL0 473 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 FAM96AQ9H5X1 160 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 CHRAC1Q9NRG0 131 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 BFARQ9NZS9 450 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 SLC23A2Q9UGH3 650 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 SLC2A6Q9UGQ3 507 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 ASIC3Q9UHC3 531 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 CRLS1Q9UJA2 301 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 PADI4Q9UM07 663 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 KCNK6Q9Y257 313 aa9.46□□□□□ -0.9
HCCAT5-201ENST00000569990 IGLV3-16A0A075B6K0 115 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CCDC162PA2VCL2 907 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 A6NCN8 305 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 OR51F1A6NGY5 319 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PRR19A6NJB7 356 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 KMOO15229 486 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 EML2O95834 649 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PRSS56P0CW18 603 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 MLNP12872 115 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 ZNF7P17097 686 aaPredicted RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 MSH3P20585 1137 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 MGAT1P26572 445 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 AKT1P31749 480 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 FOXN2P32314 431 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 MAGEA3P43357 314 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CDKN1CP49918 316 aaPredicted RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CLCNKAP51800 687 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CTSCP53634 463 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SARNPP82979 210 aaKnown RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SHC2P98077 582 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 B4GALNT1Q00973 533 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 E2F1Q01094 437 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 DR1Q01658 176 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CACNG1Q06432 222 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 HLTFQ14527 1009 aaKnown RBP eCLIP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SMAD1Q15797 465 aaKnown RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 INSCQ1MX18 579 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 ZRANB3Q5FWF4 1079 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PCID2Q5JVF3 399 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PERM1Q5SV97 790 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 RNASEH2BQ5TBB1 312 aaKnown RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SYDE1Q6ZW31 735 aaPredicted RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 NLRP9Q7RTR0 991 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CAND1Q86VP6 1230 aaKnown RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 JAMLQ86YT9 394 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 TRAPPC5Q8IUR0 188 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PPIL6Q8IXY8 311 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PIANPQ8IYJ0 282 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 NAGSQ8N159 534 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 NAT8LQ8N9F0 302 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SPATA4Q8NEY3 305 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 OR6C4Q8NGE1 309 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PATE1Q8WXA2 126 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 HDAC10Q969S8 669 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 TRIM44Q96DX7 344 aaPredicted RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 CCDC97Q96F63 343 aaPredicted RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SGSM3Q96HU1 749 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SERPINB12Q96P63 405 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 COPS8Q99627 209 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 TIMM29Q9BSF4 260 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 XAB2Q9HCS7 855 aaKnown RBP9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 KLC4Q9NSK0 619 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 TREX1Q9NSU2 369 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 SYBUQ9NX95 663 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 ZDHHC3Q9NYG2 299 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 TBC1D29Q9UFV1 150 aa9.45□□□□□ -0.9
HCCAT5-201ENST00000569990 PLXNB3Q9ULL4 1909 aa9.44□□□□□ -0.9
HCCAT5-201ENST00000569990 OR2AG2A6NM03 316 aa9.44□□□□□ -0.9
HCCAT5-201ENST00000569990 GOLGA8MH3BSY2 632 aa9.44□□□□□ -0.9
HCCAT5-201ENST00000569990 DNALI1O14645 258 aaPredicted RBP9.44□□□□□ -0.9
HCCAT5-201ENST00000569990 TTI1O43156 1089 aa9.44□□□□□ -0.9
HCCAT5-201ENST00000569990 SGTAO43765 313 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms