RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 AADATQ8N5Z0 425 aa10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 PIWIL2Q8TC59 973 aaKnown RBP10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 PRR11Q96HE9 360 aaPredicted RBP10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 GAS2L1Q99501 681 aaPredicted RBP10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 TTC1Q99614 292 aa10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 EBF4Q9BQW3 602 aa10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 UBE2ZQ9H832 354 aaPredicted RBP10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 SERGEFQ9UGK8 458 aa10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 SUN2Q9UH99 717 aa10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 NUMA1Q14980 2115 aa10.81□□□□□ -0.68
PDXDC1-216ENST00000569715 LRRC14BA6NHZ5 514 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 MMP20O60882 483 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 IPO13O94829 963 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 DRD3P35462 400 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 ARFIP2P53365 341 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PRKAA2P54646 552 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PPM1EQ8WY54 764 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 KIAA1191Q96A73 305 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PPP1R16AQ96I34 528 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 COQ10AQ96MF6 247 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 DRC3Q9H069 523 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 TFB2MQ9H5Q4 396 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PIAS3Q9Y6X2 628 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 K7ESM1 405 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 H2AFYO75367 372 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 UBOX5O94941 541 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 C6P13671 934 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 NFKBIAP25963 317 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 NSG1P42857 185 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 IL2P60568 153 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PREPLQ4J6C6 727 aaPredicted RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PIP5KL1Q5T9C9 394 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SLC44A3Q8N4M1 653 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 NKAPQ8N5F7 415 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 PPP4R1Q8TF05 950 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SREK1Q8WXA9 508 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 FUBP1Q96AE4 644 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 MYLK2Q9H1R3 596 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SLC6A17Q9H1V8 727 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 DYRK4Q9NR20 520 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SMOXQ9NWM0 555 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 C1QTNF3-AMACRE9PGA6 284 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 WNT9AO14904 365 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 NARSO43776 548 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SIX3O95343 332 aaPredicted RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 AKT1P31749 480 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SKIV2L2P42285 1042 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 DNAJB13P59910 316 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SATB1Q01826 763 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 CAMK2GQ13555 558 aaPredicted RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 SKIV2LQ15477 1246 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 VWA5B1Q5TIE3 1220 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 CCDC121Q6ZUS5 278 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 Q7L0L9 218 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 DSG4Q86SJ6 1040 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 ALYREFQ86V81 257 aaKnown RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 TRAM1L1Q8N609 369 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 ULK4Q96C45 1275 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 AP2M1Q96CW1 435 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 DTD2Q96FN9 168 aa10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 NFKBIL1Q9UBC1 381 aaPredicted RBP10.8□□□□□ -0.68
PDXDC1-216ENST00000569715 NCF1BA6NI72 391 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 NCF1CA8MVU1 366 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 NEMP1O14524 444 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ZNF195O14628 629 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 KERAO60938 352 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 RECQL5O94762 991 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 NCF1P14598 390 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 TSPAN8P19075 237 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 TNFRSF4P43489 277 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ACSBG2Q5FVE4 666 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 TMEM196Q5HYL7 178 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 PTGR2Q8N8N7 351 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 RHEBL1Q8TAI7 183 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ERP27Q96DN0 273 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 RSPH9Q9H1X1 276 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 TNFRSF12AQ9NP84 129 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 RNF112Q9ULX5 631 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 TRPM6Q9BX84 2022 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 A0A1W2PPC1 479 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 TMEM233B4DJY2 109 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 SUPT3HB4E1H0 165 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 INPP4BO15327 924 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ADAM23O75077 832 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 SUPT3HO75486 399 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 KIAA0754O94854 1291 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 SOD1P00441 154 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 SERPINB3P29508 390 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 HK3P52790 923 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ATP6V0D1P61421 351 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ELP6Q0PNE2 266 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 SMAD4Q13485 552 aaKnown RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 CST6Q15828 149 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 PFKFB4Q16877 469 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 MTDHQ86UE4 582 aaKnown RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 ZBTB2Q8N680 514 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 BEND7Q8N7W2 519 aaPredicted RBP10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 HDAC8Q9BY41 377 aa10.79□□□□□ -0.68
PDXDC1-216ENST00000569715 MKRN2Q9H000 416 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms