RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 NR1D2Q14995 579 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 RTP5Q14D33 572 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 IYDQ6PHW0 289 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 PPP1R21Q6ZMI0 780 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 ZNF438Q7Z4V0 828 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 SNX20Q7Z614 316 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 SPRED1Q7Z699 444 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 TRAPPC5Q8IUR0 188 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 ZNF547Q8IVP9 402 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 SFRP1Q8N474 314 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 MS4A14Q96JA4 679 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 DNAJC1Q96KC8 554 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 OSBPL9Q96SU4 736 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 NLE1Q9NVX2 485 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 PIH1D1Q9NWS0 290 aaKnown RBP13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 SLC23A2Q9UGH3 650 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 CRLS1Q9UJA2 301 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 ZMIZ1Q9ULJ6 1067 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 PCDHB1Q9Y5F3 818 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 ENTPD2Q9Y5L3 495 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 DNMT3AQ9Y6K1 912 aaPredicted RBP13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 AK5Q9Y6K8 562 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 SLC30A1Q9Y6M5 507 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 CACNA1BQ00975 2339 aa13.62□□□□□ -0.23
HERPUD1-218ENST00000569569 KIR2DS5A0A0G2JLQ3 304 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 A0A0G2JNG1 304 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 MROH6A6NGR9 719 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 USP27XA6NNY8 438 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 TMX2-CTNND1H3BSU7 103 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 KIR2DS3K7RE56 304 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 PGRMC1O00264 195 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 CES2O00748 559 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 B4GAT1O43505 415 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 SNX2O60749 519 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 EML2O95834 649 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 APRTP07741 180 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 VCLP18206 1134 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 MSH3P20585 1137 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 ITGALP20701 1170 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 ALDH4A1P30038 563 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 AKT1P31749 480 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 MC4RP32245 332 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 SEPT6Q14141 434 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 KIR2DS5Q14953 304 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 SKIDA1Q1XH10 827 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 PLA2G4EQ3MJ16 856 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 GPR33Q49SQ1 333 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 TMEM220Q6QAJ8 160 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 C11orf96Q7Z7L8 435 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 SLC9B2Q86UD5 537 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 RASGEF1AQ8N9B8 481 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 ACTRT1Q8TDG2 376 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 SLC37A2Q8TED4 501 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 MAGOHBQ96A72 148 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 ULK4Q96C45 1275 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 ZNF514Q96K75 400 aaPredicted RBP13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 OSGEPL1Q9H4B0 414 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 STN1Q9H668 368 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 CASS4Q9NQ75 786 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 PRDM8Q9NQV8 689 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 EIF2B3Q9NR50 452 aaKnown RBP13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 SNX12Q9UMY4 172 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 DNAJC16Q9Y2G8 782 aa13.61□□□□□ -0.23
HERPUD1-218ENST00000569569 USP24Q9UPU5 2620 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 DMXL2Q8TDJ6 3036 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 HEATR9A2RTY3 570 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 A6NCN8 305 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 OR2AG2A6NM03 316 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 D6RAR5 112 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 RALBP11234 206 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 IDSP22304 550 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 ADRA1DP25100 572 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 PSMA3P25788 255 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 GRIA1P42261 906 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 CTSCP53634 463 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 OR1D5P58170 312 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 BASP1P80723 227 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 CYP1B1Q16678 543 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 PIM3Q86V86 326 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 AMZ2Q86W34 360 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 PROSER1Q86XN7 944 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 AVL9Q8NBF6 648 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 COG1Q8WTW3 980 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 HEXDCQ8WVB3 486 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 SH3KBP1Q96B97 665 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 ATXN7L3BQ96GX2 97 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 TMEM74Q96NL1 305 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 RANBP9Q96S59 729 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 SLC38A3Q99624 504 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 AP1M1Q9BXS5 423 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 FAM96AQ9H5X1 160 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 SARS2Q9NP81 518 aaKnown RBP13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 ATXN7L1Q9ULK2 861 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 PYCARDQ9ULZ3 195 aa13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 ANKRD11Q6UB99 2663 aaPredicted RBP13.6□□□□□ -0.23
HERPUD1-218ENST00000569569 PRR19A6NJB7 356 aa13.59□□□□□ -0.23
HERPUD1-218ENST00000569569 AP3B1O00203 1094 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms