RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SCOCQ9UIL1 159 aa5.68□□□□□ -1.5
CDH13-213ENST00000569454 LZTS1Q9Y250 596 aa5.68□□□□□ -1.5
CDH13-213ENST00000569454 MTF2Q9Y483 593 aaPredicted RBP5.68□□□□□ -1.5
CDH13-213ENST00000569454 KCTD3Q9Y597 815 aa5.68□□□□□ -1.5
CDH13-213ENST00000569454 PCDHB9Q9Y5E1 797 aa5.68□□□□□ -1.5
CDH13-213ENST00000569454 MRPL42Q9Y6G3 142 aaKnown RBP5.68□□□□□ -1.5
CDH13-213ENST00000569454 WASF2Q9Y6W5 498 aa5.68□□□□□ -1.5
CDH13-213ENST00000569454 TRBV5-4A0A0C4DH59 114 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 A0A0J9YYE9 177 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TMEM233B4DJY2 109 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 UBXN8O00124 270 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 QSOX1O00391 747 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 IFRD1O00458 451 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 CCL22O00626 93 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 KIAA0355O15063 1070 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 ANGPT2O15123 496 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 RAD51BO15315 384 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TEX28O15482 410 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 BUD23O43709 281 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 NRP2O60462 931 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 GREM1O60565 184 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TSPAN3O60637 253 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 SNAP91O60641 907 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 DNAJA2O60884 412 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 LILRB3O75022 631 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PEX14O75381 377 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 ECI2O75521 394 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PRAMEF1O95521 474 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 BAG2O95816 211 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TSPAN12O95859 305 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 OTCP00480 354 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TIMP1P01033 207 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TRBC1P01850 177 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 JUNP05412 331 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 C8BP07358 591 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PDHA1P08559 390 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 RAG1P15918 1043 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 CHRM3P20309 590 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 MSH3P20585 1137 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 DGKAP23743 735 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 GABRR2P28476 465 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 HOXA9P31269 272 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 FMO4P31512 558 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 SPAM1P38567 509 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 MAPK9P45984 424 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 CCR10P46092 362 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 SGSHP51688 502 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 THOP1P52888 689 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 SH3BGRP55822 239 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 SNRPD1P62314 119 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 POLR2LP62875 67 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 TIAL1Q01085 375 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDH13-213ENST00000569454 MAD2L1Q13257 205 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 PEX6Q13608 980 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TRIM25Q14258 630 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 RPS6KA2Q15349 733 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PCBP2Q15366 365 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDH13-213ENST00000569454 OR4D1Q15615 310 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TSNQ15631 228 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 ZNF423Q2M1K9 1284 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 KIF19Q2TAC6 998 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PLEKHG6Q3KR16 790 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 AGKQ53H12 422 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 ARHGAP15Q53QZ3 475 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 XKR7Q5GH72 579 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TCHHL1Q5QJ38 904 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 PPM1LQ5SGD2 360 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 OGFRL1Q5TC84 451 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 TMEM198Q66K66 360 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 REP15Q6BDI9 236 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PTRHD1Q6GMV3 140 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 ELMSAN1Q6PJG2 1045 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PAQR3Q6TCH7 311 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 IZUMO2Q6UXV1 221 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 MACC1Q6ZN28 852 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TPGS1Q6ZTW0 290 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 GPRIN3Q6ZVF9 776 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 C16orf59Q7L2K0 433 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TMEM150AQ86TG1 271 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 LDB1Q86U70 411 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 TMC8Q8IU68 726 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 DDIASQ8IXT1 998 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 FAM9CQ8IZT9 166 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 TCAIMQ8N3R3 496 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 RYBPQ8N488 228 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 FIBCD1Q8N539 461 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 PCDH20Q8N6Y1 951 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 ARL14EPQ8N8R7 260 aaPredicted RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 PDPRQ8NCN5 879 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 ICA1LQ8NDH6 482 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 ADCY4Q8NFM4 1077 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 OR2AP1Q8NGE2 309 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 DDI1Q8WTU0 396 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 UBTD2Q8WUN7 234 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 NRG4Q8WWG1 115 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 EXT2Q93063 718 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 POP5Q969H6 163 aaKnown RBP5.67□□□□□ -1.5
CDH13-213ENST00000569454 PBXIP1Q96AQ6 731 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 FAM136AQ96C01 138 aa5.67□□□□□ -1.5
CDH13-213ENST00000569454 ULK4Q96C45 1275 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms