RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 OR2Y1Q8NGV0 311 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 AGAP11Q8TF27 550 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 CASKIN2Q8WXE0 1202 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 HAS2Q92819 552 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 SEMA4DQ92854 862 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 PTERQ96BW5 349 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 C1orf74Q96LT6 269 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 PLEKHG4BQ96PX9 1271 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 SLC2A13Q96QE2 648 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 UCK2Q9BZX2 261 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 SLC6A20Q9NP91 592 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 COX16Q9P0S2 106 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 HPCAL4Q9UM19 191 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 LUC7L2Q9Y383 392 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 PTRH2Q9Y3E5 179 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 TENM1Q9UKZ4 2725 aa6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 SNRNP200O75643 2136 aaKnown RBP6.46□□□□□ -1.38
HERPUD1-217ENST00000569429 CR1P17927 2039 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 SLC9B1P1A6NJY1 282 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 FAM90A27PA6NNH2 459 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 MAPK13O15264 365 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 DNAJC6O75061 913 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 KLHL18O94889 574 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 VIPP01282 170 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 GLI1P08151 1106 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 PAEPP09466 180 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 AGXTP21549 392 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 SLC19A1P41440 591 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 GPD2P43304 727 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 DCAF7P61962 342 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 YWHAEP62258 255 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 ABRQ12979 859 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 GPR19Q15760 415 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 PTCHD3Q3KNS1 767 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 Q5PR19 223 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 BRMS1LQ5PSV4 323 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 CFAP58Q5T655 872 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 SMYD5Q6GMV2 418 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 RAET1GQ6H3X3 334 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 PRSS57Q6UWY2 283 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 LINC00696Q6ZRV3 163 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 ZZZ3Q8IYH5 903 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 DEFB106AQ8N104 65 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 MYRIPQ8NFW9 859 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 STK32AQ8WU08 396 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 GPR137Q96N19 417 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 NCAPGQ9BPX3 1015 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 ZSWIM1Q9BR11 485 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 C19orf24Q9BVV8 132 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 ACTR5Q9H9F9 607 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM8AQ9HCN3 771 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 RAB20Q9NX57 234 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 PPP4R2Q9NY27 417 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM98Q9Y2Y6 226 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 SNX10Q9Y5X0 201 aa6.45□□□□□ -1.38
HERPUD1-217ENST00000569429 CADP27708 2225 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 C17orf113A0A1B0GUU1 675 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 KDELR3O43731 214 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 SNX2O60749 519 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 MLYCDO95822 493 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 TSPAN12O95859 305 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 UMODP07911 640 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 BMP7P18075 431 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 CD53P19397 219 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 GTF2H1P32780 548 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 TXLNAP40222 546 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 STAT6P42226 847 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 ARL4DP49703 201 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 CTSCP53634 463 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 EPHB1P54762 984 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 MARSP56192 900 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 RHOAP61586 193 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 PPP1CAP62136 330 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 NRG1Q02297 640 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 DPTQ07507 201 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 ADCY2Q08462 1091 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 NME3Q13232 169 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 CUL2Q13617 745 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 PCBP2Q15366 365 aaKnown RBP eCLIP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 TAF5Q15542 800 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 ZNF789Q5FWF6 425 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 KRT39Q6A163 491 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 CNNM4Q6P4Q7 775 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 LEKR1Q6ZMV7 388 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 INTS8Q75QN2 995 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 B4GALNT4Q76KP1 1039 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 MARK2Q7KZI7 788 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 CHST15Q7LFX5 561 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 TMEM110Q86TL2 294 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 CXorf67Q86X51 503 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 DNAAF5Q86Y56 855 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 HIPK1Q86Z02 1210 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 RBM12BQ8IXT5 1001 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 LRRC75A-AS1Q8N1F1 130 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 TEKT4Q8WW24 435 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 HDAC10Q969S8 669 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 ECHDC3Q96DC8 303 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 DTD2Q96FN9 168 aa6.44□□□□□ -1.38
HERPUD1-217ENST00000569429 Q96MF0 132 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms