RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CLPPQ16740 277 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 SETMARQ53H47 684 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 INO80DQ53TQ3 878 aaPredicted RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ZFP1Q6P2D0 407 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 FAM151BQ6UXP7 276 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 DHFR2Q86XF0 187 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CAMK1DQ8IU85 385 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MIER2Q8N344 545 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CLDN19Q8N6F1 224 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 L3HYPDHQ96EM0 354 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TRIB3Q96RU7 358 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MGME1Q9BQP7 344 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 CENPKQ9BS16 269 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 APOL5Q9BWW9 433 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 TDRD1Q9BXT4 1180 aaKnown RBP8.69□□□□□ -1.02
LINC00558-201ENST00000569422 GRIP2Q9C0E4 1043 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 ZDHHC7Q9NXF8 308 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 PRKAG2Q9UGJ0 569 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 MED16Q9Y2X0 877 aa8.69□□□□□ -1.02
LINC00558-201ENST00000569422 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 PRRG1O14668 218 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 INPPL1O15357 1258 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 VPS26AO75436 327 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 OR4F21O95013 312 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 HSPA1AP0DMV8 641 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 HSPA1BP0DMV9 641 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 MTHFD1P11586 935 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 PKMP14618 531 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 GPX3P22352 226 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 RPL10P27635 214 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 ZNF140P52738 457 aaPredicted RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 RHOAP61586 193 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SMAD3P84022 425 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 CREB5Q02930 508 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 RABL3Q5HYI8 236 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 LHX8Q68G74 356 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 AFTPHQ6ULP2 937 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 UGT2A3Q6UWM9 527 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TPGS1Q6ZTW0 290 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 OR52B6Q8NGF0 335 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SEPT8Q92599 483 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TADA1Q96BN2 335 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SLC29A1Q99808 456 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TRMOQ9BU70 441 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 Q9H521 79 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 ENAMQ9NRM1 1142 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 NLE1Q9NVX2 485 aaPredicted RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 KCTD5Q9NXV2 234 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SLAMF8Q9P0V8 285 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 ZMYM5Q9UJ78 669 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 MKL2Q9ULH7 1088 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 NDUFAF1Q9Y375 327 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 CCDC163A0A0D9SF12 145 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 PDLIM1O00151 329 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 KDELR3O43731 214 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 CLDN11O75508 207 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SEC24DO94855 1032 aaPredicted RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TRIM16O95361 564 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 LBPP18428 481 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 ARF5P84085 180 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 AAK1Q2M2I8 961 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 CNPY1Q3B7I2 92 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TMEM95Q3KNT9 176 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SGO1Q5FBB7 561 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TXNDC8Q6A555 127 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 FRA10AC1Q70Z53 315 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SYVN1Q86TM6 617 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 GPSM1Q86YR5 675 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 ARL14EPQ8N8R7 260 aaPredicted RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 PCYOX1LQ8NBM8 494 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 FUBP1Q96AE4 644 aaKnown RBP8.68□□□□□ -1.02
LINC00558-201ENST00000569422 SPATA17Q96L03 361 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TMEM74Q96NL1 305 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 TLR9Q9NR96 1032 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 MAP10Q9P2G4 905 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 USP22Q9UPT9 525 aa8.68□□□□□ -1.02
LINC00558-201ENST00000569422 PRSS51A0A1B0GVH4 220 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 H3BNC9 293 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 NME4O00746 187 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 KERAO60938 352 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 BPNT1O95861 308 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 EPOP01588 193 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 CNPP09543 421 aaKnown RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 ATP6V1B2P21281 511 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 UGT1A1P22309 533 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 UGT1A4P22310 534 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 UGT1A3P35503 534 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 UGT1A5P35504 534 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 KPNA1P52294 538 aaPredicted RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 IL2P60568 153 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 UFM1P61960 85 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 LCP2Q13094 533 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 NFYCQ13952 458 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TAF1AQ15573 450 aaPredicted RBP8.67□□□□□ -1.02
LINC00558-201ENST00000569422 TIGD2Q4W5G0 525 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 LYSMD3Q7Z3D4 306 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 FNDC5Q8NAU1 212 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 WFDC5Q8TCV5 224 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 KIAA1191Q96A73 305 aa8.67□□□□□ -1.02
LINC00558-201ENST00000569422 BIRC8Q96P09 236 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms