RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 TNFRSF10CO14798 259 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 VEGFDO43915 354 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 DFNA5O60443 496 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 CDK14O94921 469 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 GPR89BP0CG08 455 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 ACRV1P26436 265 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 TMEM115Q12893 351 aaPredicted RBP15.86■□□□□ 0.13
USB1-215ENST00000569252 FASTKD3Q14CZ7 662 aaKnown RBP15.86■□□□□ 0.13
USB1-215ENST00000569252 MAP9Q49MG5 647 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 HSP90AA5PQ58FG0 334 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 RNF187Q5TA31 235 aaPredicted RBP15.86■□□□□ 0.13
USB1-215ENST00000569252 PEAR1Q5VY43 1037 aaPredicted RBP15.86■□□□□ 0.13
USB1-215ENST00000569252 SLC23A3Q6PIS1 610 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 DOK6Q6PKX4 331 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 MACC1Q6ZN28 852 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 SERPINA9Q86WD7 417 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 AGGF1Q8N302 714 aaeCLIP15.86■□□□□ 0.13
USB1-215ENST00000569252 NXPE1Q8N323 547 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 CERS2Q96G23 380 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 COX14Q96I36 57 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 TCF12Q99081 682 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 PARD6BQ9BYG5 372 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 SLC13A1Q9BZW2 595 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 RMI1Q9H9A7 625 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 IARS2Q9NSE4 1012 aaKnown RBP15.86■□□□□ 0.13
USB1-215ENST00000569252 SMOXQ9NWM0 555 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 ZDHHC3Q9NYG2 299 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 TXNDC16Q9P2K2 825 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 KLQ9UEF7 1012 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 ZNHIT2Q9UHR6 403 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 TMEM98Q9Y2Y6 226 aa15.86■□□□□ 0.13
USB1-215ENST00000569252 SPTY2D1-AS1A0A0U1RR47 76 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ZCWPW2A0A1B0GU75 182 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 GOLGA8KD6RF30 607 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 H3BM21 787 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 GOLGA8TH3BQL2 631 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 SOD1P00441 154 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ERVK-10P10266 1014 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 CTSEP14091 401 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ZNF7P17097 686 aaPredicted RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 SSTR1P30872 391 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 STX2P32856 288 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ARCN1P48444 511 aaKnown RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 ARRB1P49407 418 aaPredicted RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 PMS2P54278 862 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 NXPH1P58417 271 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 PPARDQ03181 441 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 MGAT5Q09328 741 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 FRG1Q14331 258 aaKnown RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 KYNUQ16719 465 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 GPRC6AQ5T6X5 926 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 STEAP4Q687X5 459 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 TRMT10CQ7L0Y3 403 aaKnown RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 RD3Q7Z3Z2 195 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 PARGQ86W56 976 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 RELL1Q8IUW5 271 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 PELI3Q8N2H9 469 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 GPR150Q8NGU9 434 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 SCG3Q8WXD2 468 aaKnown RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 ZNF514Q96K75 400 aaPredicted RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 TRIM56Q9BRZ2 755 aaKnown RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 LGR4Q9BXB1 951 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 OR2AG1Q9H205 316 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ERVMER34-1Q9H9K5 563 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ARFGAP3Q9NP61 516 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 DNAJC28Q9NX36 388 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 NSMCE4AQ9NXX6 385 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 ZFATQ9P243 1243 aa15.85■□□□□ 0.13
USB1-215ENST00000569252 CNOT6Q9ULM6 557 aaKnown RBP15.85■□□□□ 0.13
USB1-215ENST00000569252 QSOX1O00391 747 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 GAPDHSO14556 408 aaPredicted RBP15.84■□□□□ 0.13
USB1-215ENST00000569252 ARHGAP33O14559 1287 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 ERLIN1O75477 346 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 RASGRP1O95267 797 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 WNT1P04628 370 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 ATP1B2P14415 290 aaPredicted RBP15.84■□□□□ 0.13
USB1-215ENST00000569252 OGNP20774 298 aaKnown RBP15.84■□□□□ 0.13
USB1-215ENST00000569252 ECHS1P30084 290 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 FOXN2P32314 431 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 NSG1P42857 185 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 CDKN1CP49918 316 aaPredicted RBP15.84■□□□□ 0.13
USB1-215ENST00000569252 SRP54P61011 504 aaKnown RBP15.84■□□□□ 0.13
USB1-215ENST00000569252 VSNL1P62760 191 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 ITIH4Q14624 930 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 KIF19Q2TAC6 998 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 ZNF470Q6ECI4 717 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 LAYNQ6UX15 382 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 CYS1Q717R9 158 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 MARK2Q7KZI7 788 aaKnown RBP15.84■□□□□ 0.13
USB1-215ENST00000569252 PIP4P1Q86T03 277 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 TRIM74Q86UV6 250 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 MARCH9Q86YJ5 346 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 GALNT13Q8IUC8 556 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 HID1Q8IV36 788 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 RBFAQ8N0V3 343 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 PNPLA1Q8N8W4 532 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 DDHD1Q8NEL9 900 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 TSSK1BQ9BXA7 367 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 CLPBQ9H078 707 aa15.84■□□□□ 0.13
USB1-215ENST00000569252 CCDC68Q9H2F9 335 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms