RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 PPIL6Q8IXY8 311 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 NXPE1Q8N323 547 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 RASGEF1AQ8N9B8 481 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 Q8N9G6 341 aaPredicted RBP12.64□□□□□ -0.39
CDT1-203ENST00000569140 DTX3LQ8TDB6 740 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 ADAMTS14Q8WXS8 1223 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 NAT6Q93015 286 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 HDAC10Q969S8 669 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 ZNF778Q96MU6 729 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 COPS8Q99627 209 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 IL22Q9GZX6 179 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 CHRAC1Q9NRG0 131 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 PCYOX1Q9UHG3 505 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 NEU2Q9Y3R4 380 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 PCDHGA1Q9Y5H4 931 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 U3KQA8 63 aa12.64□□□□□ -0.39
CDT1-203ENST00000569140 KNL1Q8NG31 2342 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 PLXNB3Q9ULL4 1909 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 EME2A4GXA9 379 aaPredicted RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 FAM149AA5PLN7 773 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 DNALI1O14645 258 aaPredicted RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 NOBOXO60393 691 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 ACRV1P26436 265 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 PTGIRP43119 386 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 CTSCP53634 463 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 MRPS25P82663 173 aaKnown RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 CKAP4Q07065 602 aaKnown RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 ILKQ13418 452 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 GPR33Q49SQ1 333 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 PERM1Q5SV97 790 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 HES3Q5TGS1 186 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 CES3Q6UWW8 571 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 SYDE1Q6ZW31 735 aaPredicted RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 OR13J1Q8NGT2 312 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 PATE1Q8WXA2 126 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 SGF29Q96ES7 293 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 TTC1Q99614 292 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 CCDC3Q9BQI4 270 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 XAB2Q9HCS7 855 aaKnown RBP12.63□□□□□ -0.39
CDT1-203ENST00000569140 ANAPC5Q9UJX4 755 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 KLK13Q9UKR3 277 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 ANGPTL2Q9UKU9 493 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 ST14Q9Y5Y6 855 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 MAD1L1Q9Y6D9 718 aa12.63□□□□□ -0.39
CDT1-203ENST00000569140 H7C0S8 307 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 CHUKO15111 745 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 POP7O75817 140 aaKnown RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 CDK4P11802 303 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 SLC2A4P14672 509 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 JUPP14923 745 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 RPL10P27635 214 aaKnown RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 NMBRP28336 390 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 PMLP29590 882 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 MAGEA6P43360 314 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 E2F1Q01094 437 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 DHX34Q14147 1143 aaKnown RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 RNASEH2BQ5TBB1 312 aaKnown RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 RAB44Q7Z6P3 723 aaPredicted RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 AMZ2Q86W34 360 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 ZNF547Q8IVP9 402 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 MPP5Q8N3R9 675 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 GALNT15Q8N3T1 639 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 GPR156Q8NFN8 814 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 OR4L1Q8NH43 312 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 SLCO2A1Q92959 643 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 ZNF669Q96BR6 464 aaPredicted RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 CCDC97Q96F63 343 aaPredicted RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 SERPINB12Q96P63 405 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 C19orf43Q9BQ61 176 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 TIMM29Q9BSF4 260 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 SCNM1Q9BWG6 230 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 STN1Q9H668 368 aaKnown RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 PRDM8Q9NQV8 689 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 ZDHHC3Q9NYG2 299 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.62□□□□□ -0.39
CDT1-203ENST00000569140 LRIT1Q9P2V4 623 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 TBC1D29Q9UFV1 150 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 SLC23A2Q9UGH3 650 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 RNF215Q9Y6U7 377 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 CABIN1Q9Y6J0 2220 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 DCHS1Q96JQ0 3298 aa12.62□□□□□ -0.39
CDT1-203ENST00000569140 SDR42E2A6NKP2 422 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 EFCAB8A8MWE9 144 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 OPA1O60313 960 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
CDT1-203ENST00000569140 GP1BAP07359 652 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 GLB1P16278 677 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 PAMP19021 973 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 IDSP22304 550 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 ALDH4A1P30038 563 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 FOXN2P32314 431 aa12.61□□□□□ -0.39
CDT1-203ENST00000569140 MAPK9P45984 424 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms