RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 HHEXQ03014 270 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 TRA2AQ13595 282 aaKnown RBP eCLIP7.71□□□□□ -1.18
CDH3-209ENST00000569080 PTPRCAPQ14761 206 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 KIR2DS5Q14953 304 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 TGIF1Q15583 401 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 CHRNA6Q15825 494 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 PLA2G4EQ3MJ16 856 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 ANKRD20A2Q5SQ80 823 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 ANKRD20A1Q5TYW2 823 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 ANKRD20A3Q5VUR7 823 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 KCTD11Q693B1 232 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 DENND5AQ6IQ26 1287 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 INO80CQ6PI98 192 aaPredicted RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 FAM151BQ6UXP7 276 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 GPR155Q7Z3F1 870 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 GLT6D1Q7Z4J2 308 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 LRRTM4Q86VH4 590 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 DTX1Q86Y01 620 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 DDHD1Q8NEL9 900 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 CCDC110Q8TBZ0 833 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 BLOC1S5Q8TDH9 187 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 CCDC97Q96F63 343 aaPredicted RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 HES6Q96HZ4 224 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 CMKLR1Q99788 373 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 FICDQ9BVA6 458 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 B3GNT4Q9C0J1 378 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 UCK1Q9HA47 277 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 PRDM8Q9NQV8 689 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 KLC4Q9NSK0 619 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 OGFRQ9NZT2 677 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 IMPACTQ9P2X3 320 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 R3HDM2Q9Y2K5 976 aaKnown RBP7.71□□□□□ -1.18
CDH3-209ENST00000569080 PCDHGA3Q9Y5H0 932 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 PIEZO2Q9H5I5 2752 aa7.71□□□□□ -1.18
CDH3-209ENST00000569080 HELZ2Q9BYK8 2649 aaKnown RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 TRBV23OR9-2A0A075B6M9 112 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 GLYATL1P3A0A0U1RQE8 302 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 TCRBV7S2A1N4TA0A589 114 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 AGAP14A8MT82 685 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 MIF4GDA9UHW6 222 aaKnown RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 AGRPO00253 132 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 KMOO15229 486 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 KCNN4O15554 427 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SGTAO43765 313 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 DUX1O43812 170 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A9O60656 530 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SNX2O60749 519 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 PPFIA2O75334 1257 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ANXA9O76027 345 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 PRAMEF1O95521 474 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 FTCDO95954 541 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 LIPCP11150 499 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ZNF7P17097 686 aaPredicted RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A6P19224 532 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 WT1P19544 449 aaPredicted RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A1P22309 533 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A4P22310 534 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 MPSTP25325 297 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A3P35503 534 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SLC19A1P41440 591 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 GEMP55040 296 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 GDF10P55107 478 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 XIAPP98170 497 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 VAC14Q08AM6 782 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 DMPKQ09013 629 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 TMEM115Q12893 351 aaPredicted RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 NFATC2Q13469 925 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 INSCQ1MX18 579 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 GPRC6AQ5T6X5 926 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ARHGAP40Q5TG30 622 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 AGAP9Q5VTM2 703 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 BROXQ5VW32 411 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ZDHHC20Q5W0Z9 365 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ITPRIPL1Q6GPH6 555 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 CCDC70Q6NSX1 233 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 TMEM71Q6P5X7 295 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 WDR74Q6RFH5 385 aaPredicted RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 ABRAXAS1Q6UWZ7 409 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 WASH2PQ6VEQ5 465 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 FAM83HQ6ZRV2 1179 aaPredicted RBP7.7□□□□□ -1.18
CDH3-209ENST00000569080 MICALCLQ6ZW33 695 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 PEX26Q7Z412 305 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 ARHGAP22Q7Z5H3 698 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 KIAA1328Q86T90 577 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 JAMLQ86YT9 394 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 RASGEF1AQ8N9B8 481 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SPC24Q8NBT2 197 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 OR10G6Q8NH81 332 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SLC35B2Q8TB61 432 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 TTC9Q92623 222 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 USP7Q93009 1102 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 SLC38A3Q99624 504 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 DPYSL5Q9BPU6 564 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 APOL2Q9BQE5 337 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 TBC1D10AQ9BXI6 508 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 FSD1LQ9BXM9 530 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 OSGEPL1Q9H4B0 414 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A7Q9HAW7 530 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A10Q9HAW8 530 aa7.7□□□□□ -1.18
CDH3-209ENST00000569080 UGT1A8Q9HAW9 530 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms