RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 POT1Q9NUX5 634 aa13.46□□□□□ -0.25
CNOT1-215ENST00000569020 SCHIP1Q9P0W5 487 aaPredicted RBP13.46□□□□□ -0.25
CNOT1-215ENST00000569020 DNAJC16Q9Y2G8 782 aa13.46□□□□□ -0.25
CNOT1-215ENST00000569020 ASH1LQ9NR48 2969 aaKnown RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 A0A0A6YYK5 440 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 C3orf70A6NLC5 250 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 MTX2O75431 263 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 DLGAP3O95886 979 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 MT-CYBP00156 380 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 KRT1P04264 644 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 BPIP17213 487 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 TYRP1P17643 537 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 VCLP18206 1134 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 TCN2P20062 427 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 IDSP22304 550 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 SLC19A1P41440 591 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 GFERP55789 205 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 GTF2H3Q13889 308 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 ASTE1Q2TB18 679 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 TEX44Q53QW1 395 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 NPNTQ6UXI9 565 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 BZW1Q7L1Q6 419 aaKnown RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 APOBEC4Q8WW27 367 aaKnown RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 STARD8Q92502 1023 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 RNF25Q96BH1 459 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 TTC25Q96NG3 672 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 OLFM3Q96PB7 478 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 TGM7Q96PF1 710 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 VPS35Q96QK1 796 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 DNAJC7Q99615 494 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 SIDT1Q9NXL6 827 aaKnown RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 ZNF624Q9P2J8 865 aaPredicted RBP13.45□□□□□ -0.26
CNOT1-215ENST00000569020 SLC23A2Q9UGH3 650 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 MYO18BQ8IUG5 2567 aa13.45□□□□□ -0.26
CNOT1-215ENST00000569020 RASSF9O75901 435 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 NDST3O95803 873 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 TPM1P09493 284 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 RPL10P27635 214 aaKnown RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 STAT5AP42229 794 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 SEPHS1P49903 392 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 DYNLT1P63172 113 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 SEPT6Q14141 434 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 CRTC2Q53ET0 693 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 FAM182AQ5T1J6 154 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 LRRC38Q5VT99 294 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 C16orf46Q6P387 395 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 ABRAXAS1Q6UWZ7 409 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 RASGRP3Q8IV61 690 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 RBM12BQ8IXT5 1001 aaKnown RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 C9orf43Q8TAL5 461 aaPredicted RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 GDAP1Q8TB36 358 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 TADA1Q96BN2 335 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 CXorf40BQ96DE9 158 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 ZNF768Q9H5H4 540 aaKnown RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 GLOD4Q9HC38 313 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 OGFRQ9NZT2 677 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 ANAPC2Q9UJX6 822 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 PCDHB3Q9Y5E6 796 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 SLC30A1Q9Y6M5 507 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 RPS6KL1Q9Y6S9 549 aa13.44□□□□□ -0.26
CNOT1-215ENST00000569020 SETXQ7Z333 2677 aaKnown RBP13.44□□□□□ -0.26
CNOT1-215ENST00000569020 CBFA2T2O43439 604 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 PMPCBO75439 489 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 TNNT1P13805 278 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 OAS2P29728 719 aaKnown RBP13.43□□□□□ -0.26
CNOT1-215ENST00000569020 HMGCLP35914 325 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 DLSTP36957 453 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 HALP42357 657 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 SLC1A1P43005 524 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 TNNT3P45378 269 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-215ENST00000569020 DRG2P55039 364 aaKnown RBP13.43□□□□□ -0.26
CNOT1-215ENST00000569020 TMEM115Q12893 351 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-215ENST00000569020 IL11RAQ14626 422 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 DEFB109BQ30KR1 87 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 CYB5D1Q6P9G0 228 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 C6orf15Q6UXA7 325 aaPredicted RBP13.43□□□□□ -0.26
CNOT1-215ENST00000569020 WASH2PQ6VEQ5 465 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 B4GALNT4Q76KP1 1039 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 TRAPPC5Q8IUR0 188 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 RHOT1Q8IXI2 618 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 BRSK1Q8TDC3 778 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 TEKT5Q96M29 485 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 CCDC42Q96M95 316 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 OR6C1Q96RD1 312 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 BPIFA1Q9NP55 256 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 SLC40A1Q9NP59 571 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 WASH6PQ9NQA3 447 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 UBP1Q9NZI7 540 aa13.43□□□□□ -0.26
CNOT1-215ENST00000569020 PRR19A6NJB7 356 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 AURKAO14965 403 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 KCNJ13O60928 360 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 NDUFA10O95299 355 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 BRAFP15056 766 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 ZNF28P17035 718 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 PTPN3P26045 913 aa13.42□□□□□ -0.26
CNOT1-215ENST00000569020 CAPZBP47756 277 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms