RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TDRD1Q9BXT4 1180 aaKnown RBP12.26□□□□□ -0.45
SNX29-207ENST00000568949 AKIRIN1Q9H9L7 192 aaPredicted RBP12.26□□□□□ -0.45
SNX29-207ENST00000568949 TRIM39Q9HCM9 518 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 SLC40A1Q9NP59 571 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 PKD2L2Q9NZM6 624 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 MAP10Q9P2G4 905 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 CHKBQ9Y259 395 aa12.26□□□□□ -0.45
SNX29-207ENST00000568949 DIDO1Q9BTC0 2240 aaKnown RBP12.26□□□□□ -0.45
SNX29-207ENST00000568949 CRYBG3Q68DQ2 2970 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 SEC16AO15027 2179 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 CHUKO15111 745 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 CBX6O95503 412 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 PRLP01236 227 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 JCHAINP01591 159 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 CCDC172P0C7W6 258 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 FOLR1P15328 257 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 POU3F2P20265 443 aaPredicted RBP12.25□□□□□ -0.45
SNX29-207ENST00000568949 PCK1P35558 622 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 PTGIRP43119 386 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 ITKQ08881 620 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 IHHQ14623 411 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 KRT31Q15323 416 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 BOLA3Q53S33 107 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 ANKRD20A8PQ5CZ79 823 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 ZRANB3Q5FWF4 1079 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 AGAP9Q5VTM2 703 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 IZUMO3Q5VZ72 239 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 IRGCQ6NXR0 463 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 FAM199XQ6PEV8 388 aaPredicted RBP12.25□□□□□ -0.45
SNX29-207ENST00000568949 WASH2PQ6VEQ5 465 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 ZNF517Q6ZMY9 492 aaPredicted RBP12.25□□□□□ -0.45
SNX29-207ENST00000568949 KMT5CQ86Y97 462 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 SRRM1Q8IYB3 904 aaKnown RBP12.25□□□□□ -0.45
SNX29-207ENST00000568949 TTC13Q8NBP0 860 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 FDCSPQ8NFU4 85 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 CCHCR1Q8TD31 782 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 ADAMTS17Q8TE56 1095 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 CSPG4P5Q96PW8 444 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 TIMM29Q9BSF4 260 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 OR2AG1Q9H205 316 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 WASH6PQ9NQA3 447 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 HAUS2Q9NVX0 235 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 TAS2R14Q9NYV8 317 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 LUZP4Q9P127 313 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 SLC23A2Q9UGH3 650 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 AMACRQ9UHK6 382 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 SRPK3Q9UPE1 567 aa12.25□□□□□ -0.45
SNX29-207ENST00000568949 IGHV5-51A0A0C4DH38 117 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 C1orf232A0A0U1RR37 186 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 PDZK1P1A8MUH7 402 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 KMOO15229 486 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 POLQO75417 2590 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 TMEM63AO94886 807 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 SLC25A14O95258 325 aaPredicted RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 BRAFP15056 766 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 ZNF7P17097 686 aaPredicted RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 IL1R2P27930 398 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 DSC2Q02487 901 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 GPR18Q14330 331 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 NR6A1Q15406 480 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 INSCQ1MX18 579 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 TDRD12Q587J7 1177 aaKnown RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 ZNF569Q5MCW4 686 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 CDKAL1Q5VV42 579 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 CRTC3Q6UUV7 619 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 ADGRG6Q86SQ4 1221 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 LRRTM4Q86VH4 590 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 GLIS1Q8NBF1 620 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 LPCAT1Q8NF37 534 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 OR8K5Q8NH50 307 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 MAML1Q92585 1016 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 CXorf40BQ96DE9 158 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 SNRNP40Q96DI7 357 aaKnown RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 ZNF514Q96K75 400 aaPredicted RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 PCMTD1Q96MG8 357 aaPredicted RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 SMAD5Q99717 465 aaKnown RBP12.24□□□□□ -0.45
SNX29-207ENST00000568949 NUDT9Q9BW91 350 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 TRIM7Q9C029 511 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 PCDH9Q9HC56 1237 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 FGF21Q9NSA1 209 aa12.24□□□□□ -0.45
SNX29-207ENST00000568949 ATMINO43313 823 aaPredicted RBP12.23□□□□□ -0.45
SNX29-207ENST00000568949 CPNE3O75131 537 aaKnown RBP12.23□□□□□ -0.45
SNX29-207ENST00000568949 RAB40ALP0C0E4 278 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 EBLN1P0CF75 366 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 FERP16591 822 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 IDSP22304 550 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 DCDC1P59894 354 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 KCNAB1Q14722 419 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 SEPT7Q16181 437 aaKnown RBP12.23□□□□□ -0.45
SNX29-207ENST00000568949 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
SNX29-207ENST00000568949 PDPK2PQ6A1A2 396 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 TIGD7Q6NT04 549 aaPredicted RBP12.23□□□□□ -0.45
SNX29-207ENST00000568949 KLHL35Q6PF15 583 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 MED25Q71SY5 747 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 IQCKQ8N0W5 287 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 TMEM102Q8N9M5 508 aaPredicted RBP12.23□□□□□ -0.45
SNX29-207ENST00000568949 ARRDC2Q8TBH0 407 aa12.23□□□□□ -0.45
SNX29-207ENST00000568949 ENOX1Q8TC92 643 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms