RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	NR1D2	Q14995	579 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	PLA2G4E	Q3MJ16	856 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	AADACL2	Q6P093	401 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF449	Q6P9G9	518 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	RANBP10	Q6VN20	620 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	B3GNT8	Q7Z7M8	397 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	AMZ2	Q86W34	360 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	BEND7	Q8N7W2	519 aa	Predicted RBP	10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	FAM71D	Q8N9W8	422 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	AGBL5	Q8NDL9	886 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	OR4K2	Q8NGD2	314 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	OR4D9	Q8NGE8	314 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF398	Q8TD17	642 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	PTCD2	Q8WV60	388 aa	Known RBP	10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	HEXDC	Q8WVB3	486 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	PATE1	Q8WXA2	126 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	ULK4	Q96C45	1275 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	CXorf40B	Q96DE9	158 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	ASB8	Q9H765	288 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	LRRC40	Q9H9A6	602 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	IL26	Q9NPH9	171 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	LZTFL1	Q9NQ48	299 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	TBC1D29	Q9UFV1	150 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	CRLS1	Q9UJA2	301 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	SLC30A1	Q9Y6M5	507 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	APC2	O95996	2303 aa		10.23	□□□□□ -0.77
UBR1-207	ENST00000568782	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	IGHV1OR21-1	A0A087WYE8	117 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ERI2	A8K979	691 aa	Known RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	AGRP	O00253	132 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CHUK	O15111	745 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	NVL	O15381	856 aa	Known RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	DDX3Y	O15523	660 aa	Known RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	BUD23	O43709	281 aa	Known RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	MTX2	O75431	263 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	PRAMEF1	O95521	474 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ITGAL	P20701	1170 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CD82	P27701	267 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ITPKB	P27987	946 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CD1C	P29017	333 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	LIMK2	P53671	638 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	EPHA4	P54764	986 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CXADR	P78310	365 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	SQSTM1	Q13501	440 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CHRNA6	Q15825	494 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	SEPT7	Q16181	437 aa	Known RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ZNF648	Q5T619	568 aa	Predicted RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	TMEM71	Q6P5X7	295 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	GPR155	Q7Z3F1	870 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	PLXDC1	Q8IUK5	500 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	SFTPA2	Q8IWL1	248 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	LRRC8A	Q8IWT6	810 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	SPACA3	Q8IXA5	215 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	RBM12B	Q8IXT5	1001 aa	Known RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	TTC30B	Q8N4P2	665 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CCDC89	Q8N998	374 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	DNAAF3	Q8N9W5	541 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	TRIM58	Q8NG06	486 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	NCSTN	Q92542	709 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	PRR11	Q96HE9	360 aa	Predicted RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	FCRL3	Q96P31	734 aa	Predicted RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	TTC1	Q99614	292 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	C19orf43	Q9BQ61	176 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	APOL2	Q9BQE5	337 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	TMEM121	Q9BTD3	319 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	VPS37B	Q9H9H4	285 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ASCL3	Q9NQ33	180 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	PRDM8	Q9NQV8	689 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CPNE7	Q9UBL6	633 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	PCDHGA7	Q9Y5G6	932 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ST14	Q9Y5Y6	855 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ARL5A	Q9Y689	179 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	CAPN6	Q9Y6Q1	641 aa		10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	ANKRD11	Q6UB99	2663 aa	Predicted RBP	10.22	□□□□□ -0.77
UBR1-207	ENST00000568782	IGHV5-10-1	A0A0J9YXX1	117 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	CDRT15L2	A8MXV6	281 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782		F8W8V4	182 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A9	O60656	530 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SRP72	O76094	671 aa	Known RBP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	IFNB1	P01574	187 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	XRCC1	P18887	633 aa	Predicted RBP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A6	P19224	532 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A1	P22309	533 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A4	P22310	534 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	MSN	P26038	577 aa	Known RBP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	RPL10	P27635	214 aa	Known RBP	10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SLC5A2	P31639	672 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	UGT1A3	P35503	534 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	FDFT1	P37268	417 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	PDX1	P52945	283 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SEPT6	Q14141	434 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	KRT33B	Q14525	404 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	GSE1	Q14687	1217 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SKIDA1	Q1XH10	827 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	SNAP47	Q5SQN1	464 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	GPRC6A	Q5T6X5	926 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	NKAIN2	Q5VXU1	208 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	KLHL35	Q6PF15	583 aa		10.21	□□□□□ -0.77
UBR1-207	ENST00000568782	TMEM220	Q6QAJ8	160 aa		10.21	□□□□□ -0.77

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