RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 OPRD1P41143 372 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 IL12RB1P42701 662 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 NSG1P42857 185 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CPA2P48052 419 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CLCN7P51798 805 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ADARP55265 1226 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 KCNJ2P63252 427 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 HNRNPA1L2Q32P51 320 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 SLC9B1Q4ZJI4 515 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 LYPLAL1Q5VWZ2 237 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CHRDL2Q6WN34 429 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 LSMEM2Q8N112 164 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 LKAAEAR1Q8TD35 194 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 DCUN1D1Q96GG9 259 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 LRIG1Q96JA1 1093 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CNDP1Q96KN2 507 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 EML4Q9HC35 981 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 CD274Q9NZQ7 290 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SCN8AQ9UQD0 1980 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SYCE1LA8MT33 242 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 HDAC3O15379 428 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 NPHS1O60500 1241 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 KERAO60938 352 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ECI2O75521 394 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 GUCA1CO95843 209 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ESRRAP11474 423 aaPredicted RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 ZNF30P17039 623 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 MAGEA9P43362 315 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 RGS4P49798 205 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 SEC13P55735 322 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 DNAJB13P59910 316 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 HERVK_113P63132 956 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ELAVL3Q14576 367 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 ZNF284Q2VY69 593 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ZNF678Q5SXM1 525 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 C9orf64Q5T6V5 341 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ZDHHC20Q5W0Z9 365 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 FAM219BQ5XKK7 198 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 EGFLAMQ63HQ2 1017 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 CUZD1Q86UP6 607 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 KIAA1958Q8N8K9 716 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 RHEBL1Q8TAI7 183 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 PPM1EQ8WY54 764 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 FUBP1Q96AE4 644 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 FAM161BQ96MY7 647 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 PLEKHG4BQ96PX9 1271 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ATOH8Q96SQ7 321 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 RIOK2Q9BVS4 552 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 ERVK-6Q9BXR3 956 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 FBRSL1Q9HCM7 1045 aaKnown RBP6.99□□□□□ -1.29
SMG1-215ENST00000568239 ARL8BQ9NVJ2 186 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 DNAJC28Q9NX36 388 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 ZDHHC3Q9NYG2 299 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 COQ6Q9Y2Z9 468 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 DHRS7Q9Y394 339 aa6.99□□□□□ -1.29
SMG1-215ENST00000568239 TRBV5-4A0A0C4DH59 114 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 PRR5-ARHGAP8B1AHC4 643 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 H3BQ06 376 aaPredicted RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 MATN2O00339 956 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 PPP6CO00743 305 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 INPP4BO15327 924 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ATP5HO75947 161 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 PAPLNO95428 1278 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 TSPAN12O95859 305 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 APODP05090 189 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 JUNP05412 331 aaKnown RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 SERPINA6P08185 405 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 T-ENOLP0DO92 83 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 MTHFD2P13995 350 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 EEF1DP29692 281 aaKnown RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 PSMD8P48556 350 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 RASSF2P50749 326 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 PTPN5P54829 565 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ARHGAP8P85298 464 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 HSPA14Q0VDF9 509 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ITPRIPL2Q3MIP1 535 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 SPDYAQ5MJ70 313 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ZNF648Q5T619 568 aaPredicted RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 GPRC6AQ5T6X5 926 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 NUDT18Q6ZVK8 323 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 GPSM1Q86YR5 675 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 MYO1HQ8N1T3 1032 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 TRPC4APQ8TEL6 797 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 INPP5DQ92835 1189 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ELSPBP1Q96BH3 223 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 AP2M1Q96CW1 435 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 NSUN5Q96P11 429 aaKnown RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 OR52B2Q96RD2 323 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 S1PR5Q9H228 398 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 SEMA4BQ9NPR2 832 aaPredicted RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 TCF7L2Q9NQB0 619 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 OR2AG2A6NM03 316 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 ZNF195O14628 629 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 DNAJC8O75937 253 aaPredicted RBP6.98□□□□□ -1.29
SMG1-215ENST00000568239 MSH3P20585 1137 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 RPS3P23396 243 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMG1-215ENST00000568239 DGKAP23743 735 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 AGTR2P50052 363 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 MXRA7P84157 204 aa6.98□□□□□ -1.29
SMG1-215ENST00000568239 BOP1Q14137 746 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms