RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 VPS35Q96QK1 796 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 FCRL5Q96RD9 977 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 TIMM29Q9BSF4 260 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.05■□□□□ 0.48
USB1-213ENST00000566292 ASPSCR1Q9BZE9 553 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 TRIM5Q9C035 493 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 OGFRQ9NZT2 677 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 KLHL8Q9P2G9 620 aaPredicted RBP18.05■□□□□ 0.48
USB1-213ENST00000566292 ZNF624Q9P2J8 865 aaPredicted RBP18.05■□□□□ 0.48
USB1-213ENST00000566292 KLHL3Q9UH77 587 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 DNAJC16Q9Y2G8 782 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 TLN1Q9Y490 2541 aaKnown RBP18.05■□□□□ 0.48
USB1-213ENST00000566292 BSNQ9UPA5 3926 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 BOD1L1Q8NFC6 3051 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 B8ZZF3 427 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 MTSS1O43312 755 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 CDK14O94921 469 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 EPOP01588 193 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 BRAFP15056 766 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 CA5AP35218 305 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 SLC19A1P41440 591 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 ATP1A2P50993 1020 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 MC2RQ01718 297 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 SEPT7Q16181 437 aaKnown RBP18.04■□□□□ 0.48
USB1-213ENST00000566292 DCAF12Q5T6F0 453 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 C11orf63Q6NUN7 778 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 PID1Q7Z2X4 250 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 C11orf96Q7Z7L8 435 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 CCDC50Q8IVM0 306 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 RCOR2Q8IZ40 523 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 ZSCAN1Q8NBB4 408 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 AVL9Q8NBF6 648 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 RTP4Q96DX8 246 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 CTRCQ99895 268 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 SPRY4Q9C004 299 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 EPB41L1Q9H4G0 881 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 TRABDQ9H4I3 376 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 UCK1Q9HA47 277 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 APMAPQ9HDC9 416 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 IL26Q9NPH9 171 aa18.04■□□□□ 0.48
USB1-213ENST00000566292 MN1Q10571 1320 aaPredicted RBP18.03■□□□□ 0.48
USB1-213ENST00000566292 LIFP15018 202 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 GFERP55789 205 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 TMEM115Q12893 351 aaPredicted RBP18.03■□□□□ 0.48
USB1-213ENST00000566292 SLC1A5Q15758 541 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 PPP2R5EQ16537 467 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 TBR1Q16650 682 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 TMEM26Q6ZUK4 368 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 CCDC170Q8IYT3 715 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 CACNA2D3Q8IZS8 1091 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 IL22RA1Q8N6P7 574 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 IPMKQ8NFU5 416 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 RBM41Q96IZ5 413 aaKnown RBP18.03■□□□□ 0.48
USB1-213ENST00000566292 VAT1Q99536 393 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 HEMGNQ9BXL5 484 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 SLC12A9Q9BXP2 914 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 C10orf88Q9H8K7 445 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 IL17CQ9P0M4 197 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 PILRAQ9UKJ1 303 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 SLC30A1Q9Y6M5 507 aa18.03■□□□□ 0.48
USB1-213ENST00000566292 HACD1B0YJ81 288 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 GPR39O43194 453 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 BUD23O43709 281 aaKnown RBP18.02■□□□□ 0.48
USB1-213ENST00000566292 RAD1O60671 282 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 VIPP01282 170 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 TYRP1P17643 537 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 RPL10P27635 214 aaKnown RBP18.02■□□□□ 0.48
USB1-213ENST00000566292 SPAM1P38567 509 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 ABRAXAS1Q6UWZ7 409 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 BBS12Q6ZW61 710 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 BLOC1S5Q8TDH9 187 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 TEFMQ96QE5 360 aaKnown RBP18.02■□□□□ 0.48
USB1-213ENST00000566292 GORASP1Q9BQQ3 440 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 ARHGAP9Q9BRR9 750 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 FBXO8Q9NRD0 319 aa18.02■□□□□ 0.48
USB1-213ENST00000566292 RCCD1A6NED2 376 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 OR52A4PA6NMU1 304 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 PDZK1P1A8MUH7 402 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 J3QKU1 62 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 GAPDHSO14556 408 aaPredicted RBP18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A9O60656 530 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 C9P02748 559 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 ANKRD34CP0C6C1 535 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 FAM87AP0C7U9 286 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A6P19224 532 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 HLA-DPA1P20036 260 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A1P22309 533 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 UGT1A4P22310 534 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 RBL1P28749 1068 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 DRG2P55039 364 aaKnown RBP18.01■□□□□ 0.47
USB1-213ENST00000566292 MPP3Q13368 585 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 SPA17Q15506 151 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 CHRNA6Q15825 494 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 AGAP9Q5VTM2 703 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 XKR5Q6UX68 686 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 FAM151BQ6UXP7 276 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 CEACAM20Q6UY09 585 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 WASH2PQ6VEQ5 465 aa18.01■□□□□ 0.47
USB1-213ENST00000566292 TIPARPQ7Z3E1 657 aaKnown RBP18.01■□□□□ 0.47
USB1-213ENST00000566292 GLT6D1Q7Z4J2 308 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms