RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 TAX1BP1Q86VP1 789 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 PLA2G15Q8NCC3 412 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 CHRDQ9H2X0 955 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 KDM4CQ9H3R0 1056 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 TMEM216Q9P0N5 145 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 GALPQ9UBC7 116 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 TRMT6Q9UJA5 497 aaKnown RBP30.23■■■□□ 2.43
CTCF-203ENST00000566078 EMCNQ9ULC0 261 aa30.23■■■□□ 2.43
CTCF-203ENST00000566078 OAS3Q9Y6K5 1087 aaKnown RBP30.23■■■□□ 2.43
CTCF-203ENST00000566078 ASMTLO95671 621 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 RALBP11234 206 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 CD9P21926 228 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 ACSL1P33121 698 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 ETV4P43268 484 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 PPP2CBP62714 309 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 PPP2CAP67775 309 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 ZXDAP98168 799 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 DLG1Q12959 904 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 SGCGQ13326 291 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 WSCD2Q2TBF2 565 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 KHDC1Q4VXA5 237 aaKnown RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 NEK5Q6P3R8 708 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 DET1Q7L5Y6 550 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 LCA5Q86VQ0 697 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 SIDT2Q8NBJ9 832 aaKnown RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 LKAAEAR1Q8TD35 194 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 HEXDCQ8WVB3 486 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 CLDN23Q96B33 292 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 C1QTNF2Q9BXJ5 285 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 BTBD1Q9H0C5 482 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 SARS2Q9NP81 518 aaKnown RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 CNOT6Q9ULM6 557 aaKnown RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 KLHL2O95198 593 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 CCDC166P0CW27 439 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 ATP1B2P14415 290 aaPredicted RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 ZNF37AP17032 561 aaPredicted RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 ITGB6P18564 788 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 CSHL1Q14406 222 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 KYAT3Q6YP21 454 aaKnown RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 SPATA6LQ8N4H0 392 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 ARMC2Q8NEN0 867 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 ANKRD49Q8WVL7 239 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 CENPTQ96BT3 561 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 NXNL1Q96CM4 212 aa30.22■■■□□ 2.43
CTCF-203ENST00000566078 NECAB3Q96P71 396 aaPredicted RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 RUVBL2Q9Y230 463 aaKnown RBP30.22■■■□□ 2.43
CTCF-203ENST00000566078 PAK4O96013 591 aaPredicted RBP30.21■■■□□ 2.43
CTCF-203ENST00000566078 MAT2AP31153 395 aaKnown RBP30.21■■■□□ 2.43
CTCF-203ENST00000566078 IRF4Q15306 451 aa30.21■■■□□ 2.43
CTCF-203ENST00000566078 UGT3A1Q6NUS8 523 aa30.21■■■□□ 2.43
CTCF-203ENST00000566078 TP53I13Q8NBR0 393 aaPredicted RBP30.21■■■□□ 2.43
CTCF-203ENST00000566078 CD200R1Q8TD46 325 aa30.21■■■□□ 2.43
CTCF-203ENST00000566078 SLC30A3Q99726 388 aa30.21■■■□□ 2.43
CTCF-203ENST00000566078 SLC17A9Q9BYT1 436 aa30.21■■■□□ 2.43
CTCF-203ENST00000566078 UNKQ9C0B0 810 aaKnown RBP30.21■■■□□ 2.43
CTCF-203ENST00000566078 SGK2Q9HBY8 427 aa30.21■■■□□ 2.43
CTCF-203ENST00000566078 TRIM16O95361 564 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 OR56A5P0C7T3 313 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 CLCN7P51798 805 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 GNGT1P63211 74 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 IRX4P78413 519 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 TSNAXIP1Q2TAA8 658 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 MAP7D1Q3KQU3 841 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 PNCKQ6P2M8 343 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 PAQR3Q6TCH7 311 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 TRIM74Q86UV6 250 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 SPEM1Q8N4L4 309 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 CCDC63Q8NA47 563 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 OR2T34Q8NGX1 318 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 GIMAP7Q8NHV1 300 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 UBXN10Q96LJ8 280 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 C1QTNF7Q9BXJ2 289 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 IGSF5Q9NSI5 407 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 CYP8B1Q9UNU6 501 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 SIT1Q9Y3P8 196 aa30.2■■■□□ 2.43
CTCF-203ENST00000566078 LRRC72A6NJI9 287 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 PLIN3O60664 434 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 LTA4HP09960 611 aaKnown RBP30.19■■■□□ 2.42
CTCF-203ENST00000566078 RPS9P46781 194 aaKnown RBP30.19■■■□□ 2.42
CTCF-203ENST00000566078 GLRBP48167 497 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 IL9RQ01113 521 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 ADAMTSL4Q6UY14 1074 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 LENG8Q96PV6 779 aaPredicted RBP30.19■■■□□ 2.42
CTCF-203ENST00000566078 SYTL2Q9HCH5 934 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 MBNL1Q9NR56 388 aaKnown RBP30.19■■■□□ 2.42
CTCF-203ENST00000566078 MBD1Q9UIS9 605 aaPredicted RBP30.19■■■□□ 2.42
CTCF-203ENST00000566078 PLXND1Q9Y4D7 1925 aa30.19■■■□□ 2.42
CTCF-203ENST00000566078 IGLV3-19P01714 112 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 PROCP04070 461 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 DHRS4L1P0CG22 281 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 SLC26A3P40879 764 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 SKIV2L2P42285 1042 aaKnown RBP30.18■■■□□ 2.42
CTCF-203ENST00000566078 FAM83EQ2M2I3 478 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 CCDC153Q494R4 210 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 SCYL1Q96KG9 808 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 GPR78Q96P69 363 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 NMRAL1Q9HBL8 299 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 EML5Q05BV3 1969 aa30.18■■■□□ 2.42
CTCF-203ENST00000566078 DCNP07585 359 aaKnown RBP30.18■■■□□ 2.42
CTCF-203ENST00000566078 KPNA2P52292 529 aaKnown RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms