RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-215	ENST00000565442	RAD21L1	Q9H4I0	556 aa		4.38	□□□□□ -1.71
CHD9-215	ENST00000565442	MCM9	Q9NXL9	1143 aa		4.38	□□□□□ -1.71
CHD9-215	ENST00000565442	TAS2R14	Q9NYV8	317 aa		4.38	□□□□□ -1.71
CHD9-215	ENST00000565442	DNAJB4	Q9UDY4	337 aa		4.38	□□□□□ -1.71
CHD9-215	ENST00000565442	PCDHGA5	Q9Y5G8	931 aa		4.38	□□□□□ -1.71
CHD9-215	ENST00000565442	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	4.38	□□□□□ -1.71
CHD9-215	ENST00000565442	GLOD5	A6NK44	160 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	SRRM3	A6NNA2	597 aa	Predicted RBP	4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	LACTBL1	A8MY62	500 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	MID1	O15344	667 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	ZWINT	O95229	277 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	NGFR	P08138	427 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	FCGR1A	P12314	374 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	HRH2	P25021	359 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	TMPO	P42166	694 aa	Known RBP	4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	LMAN1	P49257	510 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	LTB	Q06643	244 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	CXCL9	Q07325	125 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	GRAP	Q13588	217 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	KRT33B	Q14525	404 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	MEP1A	Q16819	746 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	TMEM266	Q2M3C6	531 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	KRTCAP3	Q53RY4	240 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	KRT79	Q5XKE5	535 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	NAA16	Q6N069	864 aa	Predicted RBP	4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	SLC30A6	Q6NXT4	461 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	ATG9A	Q7Z3C6	839 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	CEP97	Q8IW35	865 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	MCEMP1	Q8IX19	187 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	ODF3L1	Q8IXM7	274 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	EMC1	Q8N766	993 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	AVL9	Q8NBF6	648 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	KCTD6	Q8NC69	237 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	SPATA22	Q8NHS9	363 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	MAGEC3	Q8TD91	643 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	UTP15	Q8TED0	518 aa	Known RBP	4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	QRFPR	Q96P65	431 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	CDRT15	Q96T59	188 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	ZPBP	Q9BS86	351 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	HGH1	Q9BTY7	390 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	RTN4R	Q9BZR6	473 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	PCDH9	Q9HC56	1237 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	SMARCAL1	Q9NZC9	954 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	MORF4L1	Q9UBU8	362 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	WNT16	Q9UBV4	365 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	SIX4	Q9UIU6	781 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	TSPYL4	Q9UJ04	414 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	PPIE	Q9UNP9	301 aa	Known RBP	4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	ZNF148	Q9UQR1	794 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	RPS6KL1	Q9Y6S9	549 aa		4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	PDS5A	Q29RF7	1337 aa	Known RBP	4.37	□□□□□ -1.71
CHD9-215	ENST00000565442	LOC102723996	A0A087X1L8	192 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	hCG_1809904	A0A1W2PP81	198 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442		A0A1W2PPE2	198 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442		A0A1W2PR64	198 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TMEM8B	A6NDV4	472 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442		A6NL46	340 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TMEM189-UBE2V1	I3L0A0	370 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442		J3QR06	171 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	ZBTB43	O43298	467 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	ZNF217	O75362	1048 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	PMS2P2	O95744	297 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	BCL10	O95999	233 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	LINC00271	P0C7V0	271 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	MYOD1	P15172	320 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	PRLR	P16471	622 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	S1PR1	P21453	382 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	NMBR	P28336	390 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	CD81	P60033	236 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TUBA1B	P68363	451 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	COG7	P83436	770 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	DLG1	Q12959	904 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	UBE2V1	Q13404	147 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	PRPF4B	Q13523	1007 aa	Known RBP	4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TNFAIP1	Q13829	316 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	RASA2	Q15283	850 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	SYT16	Q17RD7	645 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	CCDC96	Q2M329	555 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	CREB3L2	Q70SY1	520 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	ADGRA1	Q86SQ6	560 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	MINDY1	Q8N5J2	469 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	SYT2	Q8N9I0	419 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	MCU	Q8NE86	351 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	SLC20A1	Q8WUM9	679 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	SLC38A5	Q8WUX1	472 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TMCO6	Q96DC7	493 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TMEM19	Q96HH6	336 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	GFI1	Q99684	422 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TXLNGY	Q9BZA5	131 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	PSD3	Q9NYI0	1048 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	MALT1	Q9UDY8	824 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	HACL1	Q9UJ83	578 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	AMDHD2	Q9Y303	409 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	PTPRC	P08575	1304 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	ZNF644	Q9H582	1327 aa	Predicted RBP	4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	TAF1	P21675	1872 aa		4.36	□□□□□ -1.71
CHD9-215	ENST00000565442	LOC100509620	A0A075B734	347 aa		4.35	□□□□□ -1.71
CHD9-215	ENST00000565442	TCERG1	O14776	1098 aa	Known RBP	4.35	□□□□□ -1.71

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