RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 APOC4-APOC2K7ER74 178 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 PJA2O43164 708 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 SNX2O60749 519 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 PMPCBO75439 489 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 NDST3O95803 873 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 APOC2P02655 101 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 PIRTP0C851 137 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 F3P13726 295 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 ZNF8P17098 575 aaPredicted RBP18.25■□□□□ 0.51
CLN6-204ENST00000564752 NFKB1P19838 968 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 TNNT3P45378 269 aaPredicted RBP18.25■□□□□ 0.51
CLN6-204ENST00000564752 MC2RQ01718 297 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 KCNC4Q03721 635 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 SNAP47Q5SQN1 464 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 PRICKLE2Q7Z3G6 844 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 TMC3Q7Z5M5 1100 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 TMEM139Q8IV31 216 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 TXLNBQ8N3L3 684 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 TEFMQ96QE5 360 aaKnown RBP18.25■□□□□ 0.51
CLN6-204ENST00000564752 VAT1Q99536 393 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 SPATA16Q9BXB7 569 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.25■□□□□ 0.51
CLN6-204ENST00000564752 OR2AG1Q9H205 316 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 MAGEE1Q9HCI5 957 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 TRIM39Q9HCM9 518 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 ARFGAP3Q9NP61 516 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 PRDM8Q9NQV8 689 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 UBP1Q9NZI7 540 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 PILRAQ9UKJ1 303 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 SHOC2Q9UQ13 582 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 ZNF711Q9Y462 761 aa18.25■□□□□ 0.51
CLN6-204ENST00000564752 GOLGA6L6A8MZA4 724 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 RAD1O60671 282 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 SLC25A14O95258 325 aaPredicted RBP18.24■□□□□ 0.51
CLN6-204ENST00000564752 WISP1O95388 367 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 LIFP15018 202 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 CTNNA2P26232 953 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 CD68P34810 354 aaPredicted RBP18.24■□□□□ 0.51
CLN6-204ENST00000564752 RWDD2BP57060 319 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 DCDC1P59894 354 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 CLCA4Q14CN2 919 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 NOMO1Q15155 1222 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 ZNF648Q5T619 568 aaPredicted RBP18.24■□□□□ 0.51
CLN6-204ENST00000564752 ALS2CLQ60I27 953 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 PHYKPLQ8IUZ5 450 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 ZNF567Q8N184 647 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 TRAM1L1Q8N609 369 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 RTP4Q96DX8 246 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 ZSCAN5AQ9BUG6 496 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 GPR63Q9BZJ6 419 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 EPB41L1Q9H4G0 881 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 FBXO8Q9NRD0 319 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 RAD18Q9NS91 495 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 KLC4Q9NSK0 619 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 GEMIN8Q9NWZ8 242 aaKnown RBP18.24■□□□□ 0.51
CLN6-204ENST00000564752 CPNE7Q9UBL6 633 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 FAM153AQ9UHL3 310 aa18.24■□□□□ 0.51
CLN6-204ENST00000564752 GRID2IPA4D2P6 1211 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 CYSRT1A8MQ03 144 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 GPR89AB7ZAQ6 455 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 F5H423 210 aaPredicted RBP18.23■□□□□ 0.51
CLN6-204ENST00000564752 H7C0C1 242 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 CHUKO15111 745 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 GPR89BP0CG08 455 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 CETN2P41208 172 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 ATP5OP48047 213 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 UBE2IP63279 158 aaKnown RBP18.23■□□□□ 0.51
CLN6-204ENST00000564752 KIF5AQ12840 1032 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 XRCC4Q13426 336 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 ZNF569Q5MCW4 686 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 PDPK2PQ6A1A2 396 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 PID1Q7Z2X4 250 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 ADGRG6Q86SQ4 1221 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 LRRC57Q8N9N7 239 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 AVL9Q8NBF6 648 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 PLEKHG4BQ96PX9 1271 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 SRPK1Q96SB4 655 aaKnown RBP18.23■□□□□ 0.51
CLN6-204ENST00000564752 CTRCQ99895 268 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 FERMT1Q9BQL6 677 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 ZPBPQ9BS86 351 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 DESI2Q9BSY9 194 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 TBC1D10AQ9BXI6 508 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 OSBPL8Q9BZF1 889 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 UCK1Q9HA47 277 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 NFKBIL1Q9UBC1 381 aaPredicted RBP18.23■□□□□ 0.51
CLN6-204ENST00000564752 RSPH14Q9UHP6 348 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 EFR3BQ9Y2G0 817 aa18.23■□□□□ 0.51
CLN6-204ENST00000564752 LILRA5A6NI73 299 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 CAPN5O15484 640 aaPredicted RBP18.22■□□□□ 0.51
CLN6-204ENST00000564752 XRCC1P18887 633 aaPredicted RBP18.22■□□□□ 0.51
CLN6-204ENST00000564752 PTPN7P35236 360 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 MAPK9P45984 424 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 WNT3AP56704 352 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 NFKB2Q00653 900 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 OTUD4Q01804 1114 aaKnown RBP18.22■□□□□ 0.51
CLN6-204ENST00000564752 KDELC1Q6UW63 502 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 CEACAM20Q6UY09 585 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 ACTL9Q8TC94 416 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 GLYATL1Q969I3 302 aa18.22■□□□□ 0.51
CLN6-204ENST00000564752 FCRL5Q96RD9 977 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms