RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 ZNF30P17039 623 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 LPOP22079 712 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-204ENST00000563739 CA5AP35218 305 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 HSPA9P38646 679 aaKnown RBP10.18□□□□□ -0.78
SF3B3-204ENST00000563739 HCAR3P49019 387 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 SPINT3P49223 89 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 DSC2Q02487 901 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 MAMLD1Q13495 774 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 PLA2G4EQ3MJ16 856 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 PLEKHN1Q494U1 663 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF789Q5FWF6 425 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 TCP11X2Q5H9J9 407 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 PPP6R3Q5H9R7 873 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-204ENST00000563739 ERMARDQ5T6L9 678 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 CDKAL1Q5VV42 579 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 POLNQ7Z5Q5 900 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 ADGRG6Q86SQ4 1221 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 PPP1R3BQ86XI6 285 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 LZTR1Q8N653 840 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 ZBTB2Q8N680 514 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 GLIS1Q8NBF1 620 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 THAP4Q8WY91 577 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 PPM1MQ96MI6 270 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 SMAD5Q99717 465 aaKnown RBP10.18□□□□□ -0.78
SF3B3-204ENST00000563739 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-204ENST00000563739 RAB33BQ9H082 229 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 CARD9Q9H257 536 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 SLC40A1Q9NP59 571 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 KLC4Q9NSK0 619 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 SLC5A6Q9Y289 635 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 WDR37Q9Y2I8 494 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 PCNX1Q96RV3 2341 aa10.18□□□□□ -0.78
SF3B3-204ENST00000563739 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 TMEM191CA6NGB0 347 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 EIF3CLB5ME19 914 aaKnown RBP10.17□□□□□ -0.78
SF3B3-204ENST00000563739 MASP2O00187 686 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 RORAP35398 523 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 MMP13P45452 471 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 PPM1FP49593 454 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-204ENST00000563739 ABRQ12979 859 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 TUBB3Q13509 450 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 DPYSL2Q16555 572 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 RALGPS1Q5JS13 557 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CACHD1Q5VU97 1274 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 IZUMO3Q5VZ72 239 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CRTC3Q6UUV7 619 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 PAF1Q8N7H5 531 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 MLKLQ8NB16 471 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 MAML1Q92585 1016 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF501Q96CX3 271 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CSPG4P5Q96PW8 444 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 EIF3CQ99613 913 aaKnown RBP10.17□□□□□ -0.78
SF3B3-204ENST00000563739 AGPAT1Q99943 283 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 OR2AG1Q9H205 316 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CHST8Q9H2A9 424 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CLSTN2Q9H4D0 955 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 RMI1Q9H9A7 625 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 NT5MQ9NPB1 228 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CHKBQ9Y259 395 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF451Q9Y4E5 1061 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 PCDHGB7Q9Y5F8 929 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 CSAG2Q9Y5P2 127 aa10.17□□□□□ -0.78
SF3B3-204ENST00000563739 PKDREJQ9NTG1 2253 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 OR5K4A6NMS3 321 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 MFSD11O43934 449 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 PYGBP11216 843 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 PSMA2P25787 234 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 RAPSNQ13702 412 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ATP1A4Q13733 1029 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 KRT31Q15323 416 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 GPR19Q15760 415 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 SEPT7Q16181 437 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 QPCTQ16769 361 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 SMTNL2Q2TAL5 461 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ZRANB3Q5FWF4 1079 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 PLEKHS1Q5SXH7 462 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ACAD10Q6JQN1 1059 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 FBXO38Q6PIJ6 1188 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ABRAXAS1Q6UWZ7 409 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 APTXQ7Z2E3 356 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 RAVER1Q8IY67 606 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 CISD2Q8N5K1 135 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ENDOVQ8N8Q3 282 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 GPR26Q8NDV2 337 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 LRRN4Q8WUT4 740 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 MARVELD3Q96A59 401 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ZNF514Q96K75 400 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 PHF12Q96QT6 1004 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 MAP3K3Q99759 626 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 GPR87Q9BY21 358 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 NUP62CLQ9H1M0 184 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 STN1Q9H668 368 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ZBTB20Q9HC78 741 aaPredicted RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 ACSS2Q9NR19 701 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 POT1Q9NUX5 634 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 FARSAQ9Y285 508 aaKnown RBP10.16□□□□□ -0.78
SF3B3-204ENST00000563739 SVILO95425 2214 aa10.16□□□□□ -0.78
SF3B3-204ENST00000563739 SNRNP200O75643 2136 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms