RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 COL28A1Q2UY09 1125 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 P3H1Q32P28 736 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 LDLRAP1Q5SW96 308 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 GPRC6AQ5T6X5 926 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 TMEM220Q6QAJ8 160 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 LRRC69Q6ZNQ3 347 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 MICALCLQ6ZW33 695 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 DET1Q7L5Y6 550 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 ZNF438Q7Z4V0 828 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 RASGEF1AQ8N9B8 481 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 PRR11Q96HE9 360 aaPredicted RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 AHCYL2Q96HN2 611 aaKnown RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 SLC46A1Q96NT5 459 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 TLR10Q9BXR5 811 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 LRRC40Q9H9A6 602 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 WDR70Q9NW82 654 aa15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 SCHIP1Q9P0W5 487 aaPredicted RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 ANKRD11Q6UB99 2663 aaPredicted RBP15.37■□□□□ 0.05
AC009088.3-201ENST00000563605 DMXL2Q8TDJ6 3036 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 CCDC78A2IDD5 438 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 OR2AG2A6NM03 316 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 GPR89AB7ZAQ6 455 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 PLD2O14939 933 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 PSMD3O43242 534 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 POP7O75817 140 aaKnown RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 SRP72O76094 671 aaKnown RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 FGGP02679 453 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 GPR89BP0CG08 455 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 F3P13726 295 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 HOXB3P14651 431 aaPredicted RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 MSH3P20585 1137 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 PBLDP30039 288 aaPredicted RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 CTSCP53634 463 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 DRG2P55039 364 aaKnown RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 HHEXQ03014 270 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 POU6F1Q14863 301 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 OASLQ15646 514 aaKnown RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 KCTD19Q17RG1 926 aaPredicted RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 KCTD11Q693B1 232 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 ZNF574Q6ZN55 896 aaPredicted RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 SLC9B2Q86UD5 537 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 JAMLQ86YT9 394 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 RCBTB1Q8NDN9 531 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 ZNF578Q96N58 590 aaPredicted RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 FRMD8P1Q9BZ68 369 aaPredicted RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 STN1Q9H668 368 aaKnown RBP15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 ETNK1Q9HBU6 452 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 ARNT2Q9HBZ2 717 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 FAM8A1Q9UBU6 413 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 PISDQ9UG56 409 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 LHX6Q9UPM6 363 aa15.36■□□□□ 0.05
AC009088.3-201ENST00000563605 FREM2Q5SZK8 3169 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 UNC13CQ8NB66 2214 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 IGHV1OR21-1A0A087WYE8 117 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 A6NCN8 305 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 E7EVH7 732 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 LDB2O43679 373 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 AP2A1O95782 977 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 JMJD7P0C870 316 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 ZSCAN5DPP0CG00 497 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 SLC2A4P14672 509 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 IDSP22304 550 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 CCKBRP32239 447 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 FASLGP48023 281 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 XIAPP98170 497 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 PDE1BQ01064 536 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 ZFP36L1Q07352 338 aaKnown RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 NR1D2Q14995 579 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 LONRF2Q1L5Z9 754 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 SNAP47Q5SQN1 464 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 FNBP1LQ5T0N5 605 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 TRIM48Q8IWZ4 208 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 BEND7Q8N7W2 519 aaPredicted RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 CCDC89Q8N998 374 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 DNAAF3Q8N9W5 541 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 DDHD1Q8NEL9 900 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 OR52K1Q8NGK4 314 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 DTX3LQ8TDB6 740 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 SGF29Q96ES7 293 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 LIN37Q96GY3 246 aaPredicted RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 CRELD1Q96HD1 420 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 DNAJC1Q96KC8 554 aaKnown RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 TIMM29Q9BSF4 260 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 ZCCHC2Q9C0B9 1178 aaKnown RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 ASCL3Q9NQ33 180 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 THSD1Q9NS62 852 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 TMEM9Q9P0T7 183 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 CPNE7Q9UBL6 633 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 FEZ2Q9UHY8 353 aaPredicted RBP15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 CRLS1Q9UJA2 301 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 LOXL2Q9Y4K0 774 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 PCDHGA8Q9Y5G5 932 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 PKD1L2Q7Z442 2459 aa15.35■□□□□ 0.05
AC009088.3-201ENST00000563605 A0A087WV48 116 aa15.34■□□□□ 0.05
AC009088.3-201ENST00000563605 KIR2DS5A0A0G2JLQ3 304 aa15.34■□□□□ 0.05
AC009088.3-201ENST00000563605 PRAMEF33A0A0G2JMD5 474 aa15.34■□□□□ 0.05
AC009088.3-201ENST00000563605 A0A0G2JNG1 304 aa15.34■□□□□ 0.05
AC009088.3-201ENST00000563605 IGHV5-10-1A0A0J9YXX1 117 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms