RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 C1orf189Q5VU69 101 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GLYATQ6IB77 296 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 RAB12Q6IQ22 244 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FAM35AQ86V20 835 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ABI1Q8IZP0 508 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FBXO39Q8N4B4 442 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 DCP1AQ9NPI6 582 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 SALL4Q9UJQ4 1053 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PACSIN3Q9UKS6 424 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 FAM95CA0A1B0GW59 222 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ERBB2P04626 1255 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 ALDH4A1P30038 563 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 PIK3CBP42338 1070 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 MTM1Q13496 603 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 OR52K2Q8NGK3 314 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 KCNMB3Q9NPA1 279 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 KCNH7Q9NS40 1196 aa6.22□□□□□ -1.41
CLK3-212ENST00000563418 CCM2LQ9NUG4 571 aaPredicted RBP6.22□□□□□ -1.41
CLK3-212ENST00000563418 OR2AT4A6NND4 320 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 RHPN2P1A8MT19 583 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 UGT2B17O75795 530 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 CREB1P16220 341 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 CES1P23141 567 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 DNASE1P24855 282 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 HNF1BP35680 557 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 MATKP42679 507 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 MAPKAPK3Q16644 382 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 PTCHD4Q6ZW05 846 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 SPPL2AQ8TCT8 520 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 AGAP2Q99490 1192 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 COL20A1Q9P218 1284 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 USP17L3A6NCW0 530 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 USP17L4A6NCW7 530 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 ADAM10O14672 748 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 TO15178 435 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 HIST1H2AGP0C0S8 130 aaPredicted RBP6.21□□□□□ -1.41
CLK3-212ENST00000563418 HIST1H2ADP20671 130 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 ARFIP1P53367 373 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.41
CLK3-212ENST00000563418 BTN1A1Q13410 526 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 ANKRD54Q6NXT1 300 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 PKN3Q6P5Z2 889 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 USP17L1Q7RTZ2 530 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 KDELC2Q7Z4H8 507 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 TFAP2CQ92754 450 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 HIST1H2AHQ96KK5 128 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 MARK4Q96L34 752 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 HIST1H2AJQ99878 128 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 H2AFJQ9BTM1 129 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 SMURF1Q9HCE7 757 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 SAGE1Q9NXZ1 904 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 TNS3Q68CZ2 1445 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.21□□□□□ -1.41
CLK3-212ENST00000563418 H7C1Q1 480 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 CDC7O00311 574 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 EVI2BP34910 448 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 EIF2S3P41091 472 aaKnown RBP6.21□□□□□ -1.41
CLK3-212ENST00000563418 SLC38A4Q969I6 547 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 SCRN2Q96FV2 425 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 NEDD4LQ96PU5 975 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 C12orf57Q99622 126 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 TTLL2Q9BWV7 592 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 ZYG11BQ9C0D3 744 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 SNCAIPQ9Y6H5 919 aa6.21□□□□□ -1.41
CLK3-212ENST00000563418 A0A0A0MRY4 1105 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 KCNU1A8MYU2 1149 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 E2F3O00716 465 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 GM2AP17900 193 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 VEGFCP49767 419 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 SLC13A2Q13183 592 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 CSHL1Q14406 222 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 EPHA10Q5JZY3 1008 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 TIGD3Q6B0B8 471 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 LRRC71Q8N4P6 559 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 COQ10AQ96MF6 247 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 SPATA13Q96N96 652 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 MRPL4Q9BYD3 311 aaKnown RBP6.21□□□□□ -1.42
CLK3-212ENST00000563418 CYP3A43Q9HB55 503 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 ARHGAP28Q9P2N2 729 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 EGFL7Q9UHF1 273 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 SULT1C2O00338 296 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 SNX4O95219 450 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 T-ENOLP0DO92 83 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 CYP4B1P13584 511 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 BTDP43251 543 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 GRSF1Q12849 480 aaKnown RBP eCLIP6.21□□□□□ -1.42
CLK3-212ENST00000563418 HACD4Q5VWC8 232 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 LRRN1Q6UXK5 716 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 GDPGP1Q6ZNW5 385 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 CADM3Q8N126 398 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 TOMM5Q8N4H5 51 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 RIT2Q99578 217 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 METTL8Q9H825 291 aaKnown RBP6.21□□□□□ -1.42
CLK3-212ENST00000563418 BRD7Q9NPI1 651 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 WDR70Q9NW82 654 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 RUVBL1Q9Y265 456 aaKnown RBP6.21□□□□□ -1.42
CLK3-212ENST00000563418 TLR6Q9Y2C9 796 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 SPATA31D1Q6ZQQ2 1576 aa6.21□□□□□ -1.42
CLK3-212ENST00000563418 FAM149AA5PLN7 773 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms