RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 LINGO1Q96FE5 620 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PLCD4Q9BRC7 762 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 HDAC8Q9BY41 377 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 DRC3Q9H069 523 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 ACTR5Q9H9F9 607 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-208ENST00000563220 TRPV5Q9NQA5 729 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 SMOXQ9NWM0 555 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 WNT9AO14904 365 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 MTX2O75431 263 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 IPO13O94829 963 aaKnown RBP17.84■□□□□ 0.45
COMMD4-208ENST00000563220 CHRNGP07510 517 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 MTHFD2P13995 350 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 ARFIP2P53365 341 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 SATB1Q01826 763 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PON2Q15165 354 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 TSNQ15631 228 aaKnown RBP17.84■□□□□ 0.45
COMMD4-208ENST00000563220 LSMEM2Q8N112 164 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 CCNYL1Q8N7R7 359 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PIWIL2Q8TC59 973 aaKnown RBP17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PPP4R1Q8TF05 950 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 INPP5DQ92835 1189 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 TMEM237Q96Q45 408 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 TMEM120AQ9BXJ8 343 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 CDH19Q9H159 772 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 RSPH9Q9H1X1 276 aaPredicted RBP17.84■□□□□ 0.45
COMMD4-208ENST00000563220 PIAS3Q9Y6X2 628 aa17.84■□□□□ 0.45
COMMD4-208ENST00000563220 F8W8V4 182 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 HGSO14964 777 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-208ENST00000563220 NPC1O15118 1278 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 MID1O15344 667 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 MMP20O60882 483 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 HSPA4LO95757 839 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 DRD3P35462 400 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 RCN2Q14257 317 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 TMEM52BQ4KMG9 183 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 ARL13AQ5H913 290 aaPredicted RBP17.83■□□□□ 0.44
COMMD4-208ENST00000563220 FAM46CQ5VWP2 391 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 KIAA1211LQ6NV74 962 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 CACUL1Q86Y37 369 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 NRSN1Q8IZ57 195 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 PELI3Q8N2H9 469 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 FITM2Q8N6M3 262 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF781Q8N8C0 355 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 STAG3L4Q8TBR4 150 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 EXT2Q93063 718 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 AP2M1Q96CW1 435 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 DTD2Q96FN9 168 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 ZSCAN5AQ9BUG6 496 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 NCKIPSDQ9NZQ3 722 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 TICRRQ7Z2Z1 1910 aa17.83■□□□□ 0.44
COMMD4-208ENST00000563220 NPEPPSL1A6NEC2 478 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 UBXN8O00124 270 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ASGR2P07307 311 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ACTN3Q08043 901 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 SKIV2LQ15477 1246 aaKnown RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 CST6Q15828 149 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 SPRED3Q2MJR0 410 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF284Q2VY69 593 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 KHDC1Q4VXA5 237 aaKnown RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 LACTB2Q53H82 288 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 TMEM196Q5HYL7 178 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 PIP5KL1Q5T9C9 394 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 CCDC121Q6ZUS5 278 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 RALGPS2Q86X27 583 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 AADATQ8N5Z0 425 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 CCDC126Q96EE4 140 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 FADS3Q9Y5Q0 445 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 F5P12259 2224 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 BTN3A1O00481 513 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 NEMP1O14524 444 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 SYNCRIPO60506 623 aaKnown RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 KERAO60938 352 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 RECQL5O94762 991 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 TPBGLP0DKB5 382 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 C6P13671 934 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ATP1B2P14415 290 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 AQP5P55064 265 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ASPHQ12797 758 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF648Q5T619 568 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 RPS27LQ71UM5 84 aaKnown RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 DET1Q7L5Y6 550 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 CYP2U1Q7Z449 544 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 SLC22A9Q8IVM8 553 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 IL17RCQ8NAC3 791 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 BTN2A2Q8WVV5 523 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 FUBP1Q96AE4 644 aaKnown RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 PDLIM5Q96HC4 596 aaKnown RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 PHF7Q9BWX1 381 aaPredicted RBP17.82■□□□□ 0.44
COMMD4-208ENST00000563220 LATS2Q9NRM7 1088 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 KCNK4Q9NYG8 393 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 RNF112Q9ULX5 631 aa17.82■□□□□ 0.44
COMMD4-208ENST00000563220 ZNF195O14628 629 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 NPHS1O60500 1241 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 ADAM23O75077 832 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 IMPDH1P20839 514 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 MPSTP25325 297 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 NTSR1P30989 418 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 COPAP53621 1224 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 NFKB2Q00653 900 aa17.81■□□□□ 0.44
COMMD4-208ENST00000563220 CREB5Q02930 508 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms