RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PROX1Q92786 737 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 ISL2Q96A47 359 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 TTYH2Q9BSA4 534 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 CEP41Q9BYV8 373 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 RHOBTB2Q9BYZ6 727 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 LTB4R2Q9NPC1 389 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 RPRD1BQ9NQG5 326 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 NECTIN3Q9NQS3 549 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 SYBUQ9NX95 663 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 PCDHB3Q9Y5E6 796 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 V9GYQ6 96 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 MEN1O00255 615 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 ARPC2O15144 300 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 SNX2O60749 519 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 CABYRO75952 493 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 MAP3K7CLP57077 242 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 SEMA5AQ13591 1074 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 DUSP7Q16829 419 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 BOLA3Q53S33 107 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 ARHGAP17Q68EM7 881 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 TAF2Q6P1X5 1199 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 HFE2Q6ZVN8 426 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 DEFB106AQ8N104 65 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 MED10Q9BTT4 135 aa13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 PNMA8BQ9ULN7 279 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 ABT1Q9ULW3 272 aaKnown RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 MTF2Q9Y483 593 aaPredicted RBP13.92□□□□□ -0.18
GTF3C1-203ENST00000562609 TTC24A2A3L6 582 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 TGM2P21980 687 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 PKLRP30613 574 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SCNN1GP51170 649 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 MRPS6P82932 125 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SV2CQ496J9 727 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 BRMS1LQ5PSV4 323 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 C6orf141Q5SZD1 244 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 ZNF544Q6NX49 715 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 GDPD3Q7L5L3 318 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 STRADAQ7RTN6 431 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 RETREG3Q86VR2 466 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CDKL3Q8IVW4 592 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 TMEM151AQ8N4L1 468 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 LEMD2Q8NC56 503 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 MCFD2Q8NI22 146 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 OMA1Q96E52 524 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 NODALQ96S42 347 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 ASPSCR1Q9BZE9 553 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 TRIM8Q9BZR9 551 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SLIRPQ9GZT3 109 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 MKRN2Q9H000 416 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM105AQ9NUU6 356 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 ACTR3BQ9P1U1 418 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 DSEQ9UL01 958 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 ZNF638Q14966 1978 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 RALGAPA2Q2PPJ7 1873 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SNTNA6NMZ2 147 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 M0QZ92 97 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 DUSP11O75319 330 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 POMCP01189 267 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 GPIP06744 558 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 ELNP15502 786 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 AGXTP21549 392 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CYP2F1P24903 491 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 IL12AP29459 219 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 FMO4P31512 558 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CYP2C18P33260 490 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 GRK3P35626 688 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 OR3A3P47888 321 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 OR2B6P58173 313 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CAPRIN1Q14444 709 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 FAM214AQ32MH5 1076 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SYPL2Q5VXT5 272 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 IFNEQ86WN2 208 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 METTL4Q8N3J2 472 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 DTX3Q8N9I9 347 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 BRSK1Q8TDC3 778 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 NXNL1Q96CM4 212 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SEPHS2Q99611 448 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 DNAI2Q9GZS0 605 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SLA2Q9H6Q3 261 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 GTF2IRD1Q9UHL9 959 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 MYBPHLA2RUH7 354 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 SAGE2PA6NJ88 616 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 MT-CO1P00395 513 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 POLBP06746 335 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 GOT1P17174 413 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CTRB1P17538 263 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 PCMT1P22061 227 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 THPOP40225 353 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 HTR2BP41595 481 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 YBX1P67809 324 aaKnown RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 HSPA14Q0VDF9 509 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 XKR4Q5GH76 650 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CTRB2Q6GPI1 263 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 HACD2Q6Y1H2 254 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 IDO2Q6ZQW0 420 aa13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 TP53I13Q8NBR0 393 aaPredicted RBP13.91□□□□□ -0.18
GTF3C1-203ENST00000562609 CHDHQ8NE62 594 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms