RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 A0A1W2PP55 124 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 SHISA7A6NL88 538 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 FADS2P1A8MWK0 482 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 G3V2L1 256 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TK2O00142 265 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 EIF3FO00303 357 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 KPNA5O15131 536 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 PLRG1O43660 514 aaKnown RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 EDF1O60869 148 aaKnown RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 MMP20O60882 483 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 DNAJC6O75061 913 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TM7SF2O76062 418 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 SERPINE1P05121 402 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 CD1DP15813 335 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TFEBP19484 476 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 COL9A1P20849 921 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TEAD1P28347 426 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 CA5AP35218 305 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 GLRBP48167 497 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 CLCN7P51798 805 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TAS2R38P59533 333 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 CHI3L2Q15782 390 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 GKAP1Q5VSY0 366 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 PAQR3Q6TCH7 311 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TMEM207Q6UWW9 146 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 CACUL1Q86Y37 369 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 ZBTB2Q8N680 514 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 MAFAQ8NHW3 353 aaPredicted RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 RHEBL1Q8TAI7 183 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 GANCQ8TET4 914 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 ANKRD49Q8WVL7 239 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 SIPA1Q96FS4 1042 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 PDLIM5Q96HC4 596 aaKnown RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 SHDQ96IW2 340 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 MECRQ9BV79 373 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 C1QTNF7Q9BXJ2 289 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 PITPNM3Q9BZ71 974 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 MKRN2Q9H000 416 aaKnown RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 FAM107BQ9H098 131 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 PREBQ9HCU5 417 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 LATS2Q9NRM7 1088 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 SPATS2LQ9NUQ6 558 aaKnown RBP14.12□□□□□ -0.15
COMMD4-205ENST00000562310 FGFR1OP2Q9NVK5 253 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TMPRSS11EQ9UL52 423 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TMCO1Q9UM00 188 aa14.12□□□□□ -0.15
COMMD4-205ENST00000562310 TMEM114B3SHH9 223 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 TARM1B6A8C7 271 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 TRIM13O60858 407 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 PCDH8O95206 1070 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 FTH1P02794 183 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 CBSLP0DN79 551 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 ACADMP11310 421 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 FGF3P11487 239 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 ATP1B2P14415 290 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 KCNA4P22459 653 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 DGKAP23743 735 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 ATP5F1P24539 256 aaPredicted RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 CBSP35520 551 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 GPR1P46091 355 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 PGGT1BP53609 377 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 RPS21P63220 83 aaKnown RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 B4GALNT1Q00973 533 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 ZP2Q05996 745 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 STX3Q13277 289 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 IER5LQ5T953 404 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 LIPMQ5VYY2 423 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 RAET1GQ6H3X3 334 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 NEK5Q6P3R8 708 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 ADAMTSL4Q6UY14 1074 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 FAM47EQ6ZV65 393 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 SLC22A9Q8IVM8 553 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 C10orf107Q8IVU9 208 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 SIDT2Q8NBJ9 832 aaKnown RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 GIMAP7Q8NHV1 300 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 KIAA1191Q96A73 305 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 ERLEC1Q96DZ1 483 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 LINGO1Q96FE5 620 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 C7orf26Q96N11 449 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 KDM4CQ9H3R0 1056 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 SARS2Q9NP81 518 aaKnown RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 OXSMQ9NWU1 459 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 CPSF2Q9P2I0 782 aaKnown RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 WNT16Q9UBV4 365 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 NDRG2Q9UN36 371 aaKnown RBP14.11□□□□□ -0.15
COMMD4-205ENST00000562310 COQ6Q9Y2Z9 468 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 PRSS21Q9Y6M0 314 aa14.11□□□□□ -0.15
COMMD4-205ENST00000562310 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 SYCE1LA8MT33 242 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 CHURC1-FNTBB4DL54 471 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 KERAO60938 352 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 SMIM24O75264 130 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 SNNO75324 88 aaPredicted RBP14.1□□□□□ -0.15
COMMD4-205ENST00000562310 SNUPNO95149 360 aaKnown RBP14.1□□□□□ -0.15
COMMD4-205ENST00000562310 SLC25A14O95258 325 aaPredicted RBP14.1□□□□□ -0.15
COMMD4-205ENST00000562310 TRIM16O95361 564 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 GSTM1P09488 218 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 TROVE2P10155 538 aaKnown RBP eCLIP14.1□□□□□ -0.15
COMMD4-205ENST00000562310 ENO3P13929 434 aaPredicted RBP14.1□□□□□ -0.15
COMMD4-205ENST00000562310 DNAJB13P59910 316 aa14.1□□□□□ -0.15
COMMD4-205ENST00000562310 NFKB2Q00653 900 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms