RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 LEPRP48357 1165 aaKnown RBP16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PDK1Q15118 436 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ATP1A1-AS1Q5TC04 95 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 LRRTM4Q86VH4 590 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 VSIG1Q86XK7 387 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SLC35G2Q8TBE7 412 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TGM7Q96PF1 710 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DNAJC7Q99615 494 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TIMM29Q9BSF4 260 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 EFHD1Q9BUP0 239 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 GPR63Q9BZJ6 419 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 XPO4Q9C0E2 1151 aaKnown RBP16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TRIT1Q9H3H1 467 aaKnown RBP16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RAD18Q9NS91 495 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MRPS18BQ9Y676 258 aaKnown RBP16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MAST4O15021 2626 aa16.44■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PPP1R12AO14974 1030 aaPredicted RBP16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 F8A1P23610 371 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RPL10P27635 214 aaKnown RBP16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 NOP2P46087 812 aaKnown RBP16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SH3BP2P78314 561 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 FOXM1Q08050 763 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MAP7Q14244 749 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SLC14A2Q15849 920 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ABRAXAS1Q6UWZ7 409 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 C11orf96Q7Z7L8 435 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TRIM48Q8IWZ4 208 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RSC1A1Q92681 617 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ULBP3Q9BZM4 244 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ZNF768Q9H5H4 540 aaKnown RBP16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 GLOD4Q9HC38 313 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ZNF71Q9NQZ8 489 aaPredicted RBP16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SPTA1P02549 2419 aa16.43■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SSU72P8A0A1W2PR75 194 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 OR52A4PA6NMU1 304 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PDZK1P1A8MUH7 402 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TOX3O15405 576 aaPredicted RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 KIF1CO43896 1103 aaKnown RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 VEGFDO43915 354 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PMPCBO75439 489 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 NDST3O95803 873 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 KRT1P04264 644 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CAPZBP47756 277 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SEPHS1P49903 392 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DRG2P55039 364 aaKnown RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DYNLT1P63172 113 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DEFB109BQ30KR1 87 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ATP13A5Q4VNC0 1218 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CRTC2Q53ET0 693 aaPredicted RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RFX6Q8HWS3 928 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ESX1Q8N693 406 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 C9orf43Q8TAL5 461 aaPredicted RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RNF25Q96BH1 459 aaPredicted RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 VPS35Q96QK1 796 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 OR6C1Q96RD1 312 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MAK16Q9BXY0 300 aaKnown RBP16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DEF6Q9H4E7 631 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 BPIFA1Q9NP55 256 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SLC40A1Q9NP59 571 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 POT1Q9NUX5 634 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 UBP1Q9NZI7 540 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RPS6KL1Q9Y6S9 549 aa16.42■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 A0A0A6YYK5 440 aaPredicted RBP16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CDK14O94921 469 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ZFXP17010 805 aaPredicted RBP16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 AMD1P17707 334 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TCN2P20062 427 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PTPN3P26045 913 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ARHGAP25P42331 645 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 GPR18Q14330 331 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PRKD1Q15139 912 aaPredicted RBP16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 NOMO1Q15155 1222 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TEX44Q53QW1 395 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 COLEC12Q5KU26 742 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 AGAP9Q5VTM2 703 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 C16orf46Q6P387 395 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PRSS42Q7Z5A4 293 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 OR8K1Q8NGG5 319 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 APOBEC4Q8WW27 367 aaKnown RBP16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 ABHD17AQ96GS6 310 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TEKT5Q96M29 485 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CHP1Q99653 195 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SPTLC3Q9NUV7 552 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 SAE1Q9UBE0 346 aaPredicted RBP16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TRIM10Q9UDY6 481 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 WDR37Q9Y2I8 494 aa16.41■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 AKR1B10O60218 316 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 RASSF9O75901 435 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 IDSP22304 550 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 HMGCLP35914 325 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 DLSTP36957 453 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 CASRP41180 1078 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 PPP1CAP62136 330 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 MC1RQ01726 317 aa16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 TMEM115Q12893 351 aaPredicted RBP16.4■□□□□ 0.22
VPS9D1-AS1-201ENST00000562298 LRRC38Q5VT99 294 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms