RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 KIR2DS5Q14953 304 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 NOMO1Q15155 1222 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 GPR19Q15760 415 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 PCSK7Q16549 785 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF569Q5MCW4 686 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 NCBP2-AS2Q69YL0 99 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 DUS1LQ6P1R4 473 aaKnown RBP11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF765Q7L2R6 523 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 APTXQ7Z2E3 356 aaKnown RBP11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ADGRG6Q86SQ4 1221 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 AOPEPQ8N6M6 819 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ARRDC2Q8TBH0 407 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 SPOCK2Q92563 424 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC25A23Q9BV35 468 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 HSD3B7Q9H2F3 369 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF768Q9H5H4 540 aaKnown RBP11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 BPIFA1Q9NP55 256 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 KCTD5Q9NXV2 234 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 VPS18Q9P253 973 aa11.49□□□□□ -0.57
NSMCE1-202ENST00000561960 DIDO1Q9BTC0 2240 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 KCNK1O00180 336 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF185O15231 689 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 MTA2O94776 668 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 MMP2P08253 660 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ANKRD34CP0C6C1 535 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 DCTP40126 519 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 GARSP41250 739 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 CAPZBP47756 277 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF165P49910 485 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC25A11Q02978 314 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 GBE1Q04446 702 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 MAP7Q14244 749 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 PPP1R3BQ86XI6 285 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF547Q8IVP9 402 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 SRRM1Q8IYB3 904 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 NDUFAF2Q8N183 169 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 TEX26Q8N6G2 289 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 GALNT11Q8NCW6 608 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 CXorf40BQ96DE9 158 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 TCTN2Q96GX1 697 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ERGIC2Q96RQ1 377 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 EIF3CQ99613 913 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 NRTNQ99748 197 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ACSS2Q9NR19 701 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 PKD2L2Q9NZM6 624 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 PADI1Q9ULC6 663 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 SNRNP200O75643 2136 aaKnown RBP11.48□□□□□ -0.57
NSMCE1-202ENST00000561960 AURKAO14965 403 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 LCA5LO95447 670 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 JCHAINP01591 159 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 FGF5P12034 268 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 ZNF7P17097 686 aaPredicted RBP11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 CA5AP35218 305 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 SERPINB6P35237 376 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 FOXL2P58012 376 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 ZBTB17Q13105 803 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 NR6A1Q15406 480 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 INPP5JQ15735 1006 aaPredicted RBP11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 ANKRD20A8PQ5CZ79 823 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 CCDC122Q5T0U0 273 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 MICALCLQ6ZW33 695 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 TRAPPC5Q8IUR0 188 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 Q8NA96 180 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 SIDT2Q8NBJ9 832 aaKnown RBP11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC38A9Q8NBW4 561 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 CCNYQ8ND76 341 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 MR1Q95460 341 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 MAP3K3Q99759 626 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 NUDT9Q9BW91 350 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 THAP2Q9H0W7 228 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 ING2Q9H160 280 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 CARD9Q9H257 536 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 TMPRSS11EQ9UL52 423 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 MAP4K5Q9Y4K4 846 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 DOPEY1Q5JWR5 2465 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 SVILO95425 2214 aa11.47□□□□□ -0.57
NSMCE1-202ENST00000561960 OTOGQ6ZRI0 2925 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 MATN3O15232 486 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 SORBS2O94875 1100 aaKnown RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC2A4P14672 509 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 NELFEP18615 380 aaKnown RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 XRCC1P18887 633 aaPredicted RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 PCK1P35558 622 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 MYL5Q02045 173 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 KLHL30Q0D2K2 578 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 GALNT2Q10471 571 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 SLC10A2Q12908 348 aaPredicted RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 GPS2Q13227 327 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 DPYSL3Q14195 570 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 KYNUQ16719 465 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 FAM83HQ6ZRV2 1179 aaPredicted RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 LRRTM4Q86VH4 590 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 PSTKQ8IV42 348 aaKnown RBP11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 ANKRD20A12PQ8NF67 263 aa11.46□□□□□ -0.57
NSMCE1-202ENST00000561960 FDCSPQ8NFU4 85 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms