RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CD1DP15813 335 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ZNF37AP17032 561 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GM2AP17900 193 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 POU3F3P20264 500 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SAT1P21673 171 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 RPS3P23396 243 aaKnown RBP eCLIP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 FMO4P31512 558 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 LTBRP36941 435 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 OPRD1P41143 372 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GLRBP48167 497 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SLC1A6P48664 564 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 DGKGP49619 791 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TTPAP49638 278 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 PRKAA2P54646 552 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ABCE1P61221 599 aaKnown RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TFF2Q03403 129 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 CACNG1Q06432 222 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 DLX2Q07687 328 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 BNIP1Q12981 228 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ITGA9Q13797 1035 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 CSHL1Q14406 222 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ACAP2Q15057 778 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 PDGFRLQ15198 375 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SPDYAQ5MJ70 313 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 FAM91A1Q658Y4 838 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TMEM214Q6NUQ4 689 aaKnown RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GDPD4Q6W3E5 623 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 RFLNAQ6ZTI6 216 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 RAPH1Q70E73 1250 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SDCCAG8Q86SQ7 713 aaPredicted RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SIX5Q8N196 739 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 KDM1BQ8NB78 822 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GPR26Q8NDV2 337 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 HCAR2Q8TDS4 363 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SKA1Q96BD8 255 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 PTERQ96BW5 349 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 MOCOSQ96EN8 888 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 MSLNLQ96KJ4 702 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SLC30A3Q99726 388 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 HEPHQ9BQS7 1158 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TRIM55Q9BYV6 548 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GPR63Q9BZJ6 419 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 DRC3Q9H069 523 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 MRPL46Q9H2W6 279 aaKnown RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 EBF3Q9H4W6 596 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 BRD9Q9H8M2 597 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ZFYVE1Q9HBF4 777 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GPAMQ9HCL2 828 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ELOVL2Q9NXB9 296 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 KCNK4Q9NYG8 393 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 LMCD1Q9NZU5 365 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 CPSF2Q9P2I0 782 aaKnown RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 DKK3Q9UBP4 350 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 B4GALT6Q9UBX8 382 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 MID2Q9UJV3 735 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 IKZF3Q9UKT9 509 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 SZT2Q5T011 3432 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 BRWD1Q9NSI6 2320 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 PLXNA2O75051 1894 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SPTBN5Q9NRC6 3674 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 IGLV3-16A0A075B6K0 115 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 C1orf232A0A0U1RR37 186 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ANTXRLA6NF34 631 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NEMP2A6NFY4 417 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 A8MT66 165 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 OIP5O43482 229 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ZBTB14O43829 449 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NIPSNAP2O75323 286 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 H2AFYO75367 372 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NDUFS3O75489 264 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 LEFTY1O75610 366 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 RNASEH2AO75792 299 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SRP72O76094 671 aaKnown RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 FSBPO95073 299 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SCGB1D2O95969 90 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SLC4A1P02730 911 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ESR1P03372 595 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 T-ENOLP0DO92 83 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 TROVE2P10155 538 aaKnown RBP eCLIP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 MTHFD2P13995 350 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ATP5F1P24539 256 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 PTGER3P43115 390 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CCR10P46092 362 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CLCN7P51798 805 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NCALDP61601 193 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NFKB2Q00653 900 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 SEMG2Q02383 582 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ACTN3Q08043 901 aaPredicted RBP6.47□□□□□ -1.37
CAPN3-210ENST00000561817 RALGDSQ12967 914 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 NFATC2Q13469 925 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 OR4D1Q15615 310 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 CHRNA6Q15825 494 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 FAM83EQ2M2I3 478 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 GLIPR1L2Q4G1C9 344 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 ZRANB3Q5FWF4 1079 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 C9orf64Q5T6V5 341 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 AGAP9Q5VTM2 703 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 LIPMQ5VYY2 423 aa6.47□□□□□ -1.37
CAPN3-210ENST00000561817 LRRC66Q68CR7 880 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms