RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 KIR2DS5A0A0G2JLQ3 304 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 A0A0G2JNG1 304 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 A8MU76 341 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 BTNL10A8MVZ5 291 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 H7C0C1 242 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 KIR2DS3K7RE56 304 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 DUX1O43812 170 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 VEGFDO43915 354 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 CDK14O94921 469 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 AGTP01019 485 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 SLC2A4P14672 509 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 CD82P27701 267 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 CA5AP35218 305 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 TNNT3P45378 269 aaPredicted RBP10.14□□□□□ -0.79
CLK3-205ENST00000561673 ATP5OP48047 213 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 PPM1FP49593 454 aaPredicted RBP10.14□□□□□ -0.79
CLK3-205ENST00000561673 NAP1L1P55209 391 aaKnown RBP10.14□□□□□ -0.79
CLK3-205ENST00000561673 UBE2IP63279 158 aaKnown RBP10.14□□□□□ -0.79
CLK3-205ENST00000561673 TMEM115Q12893 351 aaPredicted RBP10.14□□□□□ -0.79
CLK3-205ENST00000561673 MPP3Q13368 585 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 KIR2DS5Q14953 304 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 CHRNA6Q15825 494 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 INSCQ1MX18 579 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 SNAP47Q5SQN1 464 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 CCDC181Q5TID7 509 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 VASH2Q86V25 355 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 LRRTM4Q86VH4 590 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 ZNF843Q8N446 348 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 BLOC1S5Q8TDH9 187 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 ART4Q93070 314 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 SH3KBP1Q96B97 665 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 VPS35Q96QK1 796 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 GORASP1Q9BQQ3 440 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 TBC1D10AQ9BXI6 508 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 ZMYND15Q9H091 742 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 STN1Q9H668 368 aaKnown RBP10.14□□□□□ -0.79
CLK3-205ENST00000561673 SLC39A1Q9NY26 324 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 IL17CQ9P0M4 197 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 RSPH14Q9UHP6 348 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 EFR3BQ9Y2G0 817 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 DNAJC16Q9Y2G8 782 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 BOLA1Q9Y3E2 137 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 PCDHB11Q9Y5F2 797 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 B3GALT1Q9Y5Z6 326 aa10.14□□□□□ -0.79
CLK3-205ENST00000561673 PRR19A6NJB7 356 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 EFCAB7A8K855 629 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 B4E171 279 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 STMND1H3BQB6 276 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 GPR39O43194 453 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 BUD23O43709 281 aaKnown RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A9O60656 530 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 IPO7O95373 1038 aaKnown RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 BRAFP15056 766 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 XRCC1P18887 633 aaPredicted RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A6P19224 532 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 HLA-DPA1P20036 260 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A1P22309 533 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A4P22310 534 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 CTNNA2P26232 953 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 RPL10P27635 214 aaKnown RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 PTPN7P35236 360 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A3P35503 534 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 SLC19A1P41440 591 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 TSPAN7P41732 249 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 MAPK9P45984 424 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 EPHA4P54764 986 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 RWDD2BP57060 319 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 OTUD4Q01804 1114 aaKnown RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 LY6DQ14210 128 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 SEPT7Q16181 437 aaKnown RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 MANEAQ5SRI9 462 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 ZDHHC20Q5W0Z9 365 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 AADACL2Q6P093 401 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 FAM151BQ6UXP7 276 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 GLT6D1Q7Z4J2 308 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 ARHGAP22Q7Z5H3 698 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 C11orf96Q7Z7L8 435 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 GAS2L3Q86XJ1 694 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 FAM129CQ86XR2 697 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 BMPERQ8N8U9 685 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 LRRC57Q8N9N7 239 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 ACRBPQ8NEB7 543 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 GDAP1Q8TB36 358 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 ACTL9Q8TC94 416 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 DTX3LQ8TDB6 740 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 BRSK1Q8TDC3 778 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 JPH3Q8WXH2 748 aaPredicted RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 ALG3Q92685 438 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 SGF29Q96ES7 293 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 FAM118BQ9BPY3 351 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 TIMM29Q9BSF4 260 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 FSD1LQ9BXM9 530 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.13□□□□□ -0.79
CLK3-205ENST00000561673 OSBPL8Q9BZF1 889 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 SEMA4CQ9C0C4 833 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 GBA3Q9H227 469 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 UCK1Q9HA47 277 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A7Q9HAW7 530 aa10.13□□□□□ -0.79
CLK3-205ENST00000561673 UGT1A10Q9HAW8 530 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms