RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 MFRPQ9BY79 579 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 ZCCHC2Q9C0B9 1178 aaKnown RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 RMI1Q9H9A7 625 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 EPB41L5Q9HCM4 733 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 TBC1D29Q9UFV1 150 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 SLC23A2Q9UGH3 650 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 FEZ2Q9UHY8 353 aaPredicted RBP9.99□□□□□ -0.81
HERC1-212ENST00000561348 TMPRSS11EQ9UL52 423 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PSMD13Q9UNM6 376 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 PCDHB1Q9Y5F3 818 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 RP1P56715 2156 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 ASXL3Q9C0F0 2248 aa9.99□□□□□ -0.81
HERC1-212ENST00000561348 MYLKQ15746 1914 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 SCN8AQ9UQD0 1980 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 ERI2A8K979 691 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 LDB2O43679 373 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 POP7O75817 140 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 MPOP05164 745 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 POLBP06746 335 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 GP1BAP07359 652 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 GLB1P16278 677 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 TCP1P17987 556 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 IDSP22304 550 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 MPSTP25325 297 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 COILP38432 576 aaPredicted RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 ZNF140P52738 457 aaPredicted RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 CTSCP53634 463 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 PRAMEP78395 509 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 SEMA5AQ13591 1074 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 LRP8Q14114 963 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 HLTFQ14527 1009 aaKnown RBP eCLIP9.98□□□□□ -0.81
HERC1-212ENST00000561348 ST3GAL2Q16842 350 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 SKIDA1Q1XH10 827 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 C3orf38Q5JPI3 329 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 SNAP47Q5SQN1 464 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 PHF19Q5T6S3 580 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 NKAIN2Q5VXU1 208 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 CASC4Q6P4E1 433 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 RBM44Q6ZP01 1051 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 NAGSQ8N159 534 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 RASGEF1CQ8N431 466 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 RASGEF1AQ8N9B8 481 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 SLC37A2Q8TED4 501 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 STYXQ8WUJ0 223 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 VPS35Q96QK1 796 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 DDX47Q9H0S4 455 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 LRRN3Q9H3W5 708 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 STN1Q9H668 368 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 CCDC86Q9H6F5 360 aaKnown RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 RDH14Q9HBH5 336 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 ARNT2Q9HBZ2 717 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 NLE1Q9NVX2 485 aaPredicted RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 KCNK4Q9NYG8 393 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 NFKBIL1Q9UBC1 381 aaPredicted RBP9.98□□□□□ -0.81
HERC1-212ENST00000561348 SLC2A6Q9UGQ3 507 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 WASF3Q9UPY6 502 aa9.98□□□□□ -0.81
HERC1-212ENST00000561348 TCRBV7S3A2A0A539 114 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 HEATR9A2RTY3 570 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CCDC162PA2VCL2 907 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CFAP99D6REC4 459 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 GAPDHSO14556 408 aaPredicted RBP9.97□□□□□ -0.81
HERC1-212ENST00000561348 PPM1DO15297 605 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 ZW10O43264 779 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 PHF2O75151 1096 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 DKK1O94907 266 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 VIPP01282 170 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 MGAT1P26572 445 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CASQ1P31415 396 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 PAFAH1B1P43034 410 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 ARSDP51689 593 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 SARNPP82979 210 aaKnown RBP9.97□□□□□ -0.81
HERC1-212ENST00000561348 XIAPP98170 497 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 HHEXQ03014 270 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 KRT33BQ14525 404 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 BRD3Q15059 726 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 DRICH1Q6PGQ1 229 aaPredicted RBP9.97□□□□□ -0.81
HERC1-212ENST00000561348 OGFOD3Q6PK18 319 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CES3Q6UWW8 571 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 C4orf22Q6V702 233 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 SNX20Q7Z614 316 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 AMZ2Q86W34 360 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 SERPINA9Q86WD7 417 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 OR6C4Q8NGE1 309 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 ACTRT1Q8TDG2 376 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 GRK7Q8WTQ7 553 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 HDAC10Q969S8 669 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.97□□□□□ -0.81
HERC1-212ENST00000561348 ULK4Q96C45 1275 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CXorf40BQ96DE9 158 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 SCARF2Q96GP6 870 aaPredicted RBP9.97□□□□□ -0.81
HERC1-212ENST00000561348 ATXN7L3BQ96GX2 97 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CDKN2AIPNLQ96HQ2 116 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 COPS8Q99627 209 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CHRAC1Q9NRG0 131 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 BFARQ9NZS9 450 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 KLHL3Q9UH77 587 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 ASIC3Q9UHC3 531 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 ANAPC5Q9UJX4 755 aa9.97□□□□□ -0.81
HERC1-212ENST00000561348 CFAP20Q9Y6A4 193 aaKnown RBP9.97□□□□□ -0.81
HERC1-212ENST00000561348 SAR1BQ9Y6B6 198 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms